 |
| Job Description | Q13882 | | Confidence | 99.60% | Date | Wed May 9 17:41:40 BST 2012 |
| Rank | 421 | Aligned Residues | 74 |
| % Identity | 27% | Template | c2epdA_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:rho gtpase-activating protein 4; |
PDBTitle: solution structure of sh3 domain in rho-gtpase-activating2 protein 4
|
| Resolution | UNK |
|
 |
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | R | D | Q | A | H | L | G | P | K | Y | V | G | L | W | D | F | K | S | R | T | D | E | E | L | S | F | R | A | G | D | V | F | H | V | A | R | K | E | E | Q | W | W | W | A | T | L | L | D | E | A | G | G | A | V | A | Q | G | Y | V | P | H | N | Y | L | A | E | R | E | T | V | E | S | E | P | W | F | F | G |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|
|   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| Template Sequence |   |
S | G | S | S | G | E | G | V | V | E | A | V | A | C | F | A | Y | T | G | R | T | A | Q | E | L | S | F | R | R | G | D | V | L | R | L | H | E | R | A | S | S | D | W | W | R | G | E | H | N | . |
. |
. |
. |
. |
G | M | R | G | L | I | P | H | K | Y | I | T | L | P | A | G | T | E | K | Q | V | V | G | A | G |
| Template Known Secondary structure |   |
|
|
| S | S | S |
|
|  |  |  |  |  | S | S |
|  |  |
| S | S | T | T | B |
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | . | . | . | . | . | T |  |  |  |  |  |  | S | S | S |  |  |
|
| S | S |
| S |
|
|
|
|
|
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . | . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
741 | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|