Return to main results Retrieve Phyre Job Id

Job DescriptionQ13882
Confidence100.00%DateWed May 9 17:41:40 BST 2012
Rank5Aligned Residues422
% Identity43%Templatec2c0iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: src family kinase hck with bound inhibitor a-420983
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
Predicted Secondary structure 
















































Query SS confidence 















































































Query Sequence  KYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERETVESEPWFFGCISRSEAVRR
Query Conservation    

          

    
    
       
              
 

 
 
     
    
  
 
 
  

  
Alig confidence 








































....


































Template Conservation     
          

    

   

     

       ....   
 

 
 
     
    

 
 


  

  
Template Sequence  IVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLAT. . . . RKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQ
Template Known Secondary structure  SS
B


SSSB

B
TT
TTTTT....

GGGTTSGGGSTTTT

Template Predicted Secondary structure 






















....




















Template SS confidence 















































































   61........70.........80.........90.........100. ........110.........120.........130......
 
   92.......100.........110......... 120.........130.........140.........150.........160......
Predicted Secondary structure 













.....


























Query SS confidence 



























. . . . .














































Query Sequence  LQAEGNATGAFLIRVSEKPSADYVLSVR. . . . . DTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRL
Query Conservation 
       
 



 
        


 .....    
 
  
     
   
     
 

  

  
      
   
Alig confidence 



























.....














































Template Conservation 
       
 



 
    
   


          
 
  
     
         
 

  

  
      
   
Template Sequence  LLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGNDGLCQKL
Template Known Secondary structure  TSTT

TT

SSSTT
TTTB

STT
SSTTSSSTTSS
SS
SS

Template Predicted Secondary structure 











































Template SS confidence 















































































   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  AAPCRKHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLRHKH
Query Conservation    
               

      
   

 
 

 
          



 
          
  
   
  
 


Alig confidence 































































.














Template Conservation    
                
          

 
 

 
          



 
         .   
   
  
 


Template Sequence  SVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA. FLAEANVMKTLQHDK
Template Known Secondary structure 
SB










TT
SB

GGGTTTTT


SS
.T


TT
Template Predicted Secondary structure 



































.




Template SS confidence 















































































   217..220.........230.........240.........250.........260.........270.........280 .........290.....
 
   247..250.........260.........270.........280.........290.........300.........310.........320......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  ILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLC
Query Conservation 

 
 
         




   


   
               
  

   
  
     

 

   


       
Alig confidence 







.






































































Template Conservation 

 
 
  .      

 
    
 
   
                   
   
        

  
   


       
Template Sequence  LVKLHAVV. TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVC
Template Known Secondary structure  B

.
SSS


TT
BSTTGGG

TT


S

SGGG
TT

Template Predicted Secondary structure  .






























Template SS confidence 















































































   296...300... ......310.........320.........330.........340.........350.........360.........370....
 
   327..330.........340.........350.........360.........370.........380.........390.........400......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  KVGDFGLARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRM
Query Conservation 

 





                 
 


 
     
 










 

 
 
  

       
   
  
 
 
Alig confidence 










............
























































Template Conservation 
  




   ............     


 
       








 
 

 
 
  
            
  
 
 
Template Sequence  KIADFGLARVI. . . . . . . . . . . . PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM
Template Known Secondary structure 

TTGGGT
............
GGGS




TTT

SSTT

TT


Template Predicted Secondary structure 






............
























Template SS confidence 















































































   375....380..... ....390.........400.........410.........420.........430.........440..
 
   407..410.........420.........430.........440.........450.
Predicted Secondary structure 


















Query SS confidence 












































Query Sequence  PCPLECPPSVHKLMLTCWCRDPEQRPCFKALRERLSSFTSYENPT
Query Conservation    
   
  
  

  
   

  


   
   
        

Alig confidence 












































Template Conservation    
   
  
  

  
   

  


   
   
          
Template Sequence  PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ
Template Known Secondary structure 


TT

T
SSGGGS

TTTS
GGG
Template Predicted Secondary structure 

















Template SS confidence 












































   456...460.........470.........480.........490.........500
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions