 |
| Job Description | A0JLT2 | | Confidence | 2.17% | Date | Tue Apr 3 15:10:21 BST 2012 |
| Rank | 60 | Aligned Residues | 37 |
| % Identity | 16% | Template | c3s93B_ |
| PDB info |
PDB header:transcription | Chain: B: PDB Molecule:tudor domain-containing protein 5; |
PDBTitle: crystal structure of conserved motif in tdrd5
|
| Resolution | 2.28 Å |
|
|   |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | E | Q | A | Y | N | K | F | C | G | K | K | V | K | . |
. |
. |
. |
. |
. |
E | K | L | S | N | F | L | P | D | L | P | G | M | I | D | L | P | G | S | H | D | N | S |
| Query Conservation |   |
|
|   |
|
|   |
|
|   |
|
|
|
|
| . | . | . | . | . | . |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |
|   |
| Template Sequence |   |
L | E | K | E | Y | L | L | M | V | G | N | H | L | P | L | R | I | L | G | Y | R | S | T | M | E | L | V | L | D | M | P | D | V | V | R | V | C | P | G | A | G | G | T |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S | S |
|
|
| T | G | G | G | T |
| S | S |  |  |  |  |  |  | T |
| T | T | T |  |  |  |  |  |
| G | G | G |
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|