Return to main results Retrieve Phyre Job Id

Job DescriptionA0M8Q6
Confidence99.91%DateThu Apr 26 09:16:38 BST 2012
Rank14Aligned Residues101
% Identity41%Templated2hmic2
SCOP infoImmunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like)
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50..... ....60.........70.........80...
Predicted Secondary structure 























.









Query SS confidence 


















































.



























Query Sequence  AAPSVTLFPPSSEELQANKATLVCLVSDFYPGAVTVAWKADGSPVKVGVET. TKPSKQSNNKYAASSYLSLTPEQWKSHR
Query Conservation   

 
 
         
   

 
      
    
 
   
  
      .              
 
 
         
Alig confidence 


















































.



























Template Conservation 
 
 
 
             

 
 
  
 
  
 
 
   
                   
    
 
 
         
Template Sequence  AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVAWAIDGSAAANGVLNSWTDQDSKDSTYSMSSTLTLTADEYEAAN
Template Known Secondary structure  B




TTTBSS

TTT
S




TTTS


Template Predicted Secondary structure 





































Template SS confidence 















































































   111........120.........130.........140.........150.........160.........170.........180.........190
 
   84.....90.... .....100.....
Predicted Secondary structure 


..



Query SS confidence 










. .










Query Sequence  SYSCRVTHEGS. . TVEKTVAPAEC
Query Conservation   


 
 
   ..    

  
  
Alig confidence 










..










Template Conservation   


 
 
     
   
   
  
Template Sequence  SYTCAATHKTSTSPIVKSFNANEC
Template Known Secondary structure 
TTSS




Template Predicted Secondary structure 









Template SS confidence 























   191........200.........210....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions