 |
| Job Description | A0M8Q6 | | Confidence | 99.83% | Date | Thu Apr 26 09:16:38 BST 2012 |
| Rank | 362 | Aligned Residues | 99 |
| % Identity | 27% | Template | d1otsc2 |
| SCOP info | Immunoglobulin-like beta-sandwich
| Immunoglobulin
| C1 set domains (antibody constant domain-like)
|
| Resolution | 2.51 |
|
 |
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
K | A | A | P | S | V | T | L | F | P | P | S | S | E | E | L | Q | A | N | K | A | T | L | V | C | L | V | S | D | F | Y | P | G | A | V | T | V | A | W | K | A | D | G | S | P | V | K | V | G | V | E | T | T | K | P | S | K | Q | S | N | N | K | Y | A | A | S | S | Y | L | S | L | T | P | E | Q | W | K | S | H | R |
| Query Conservation |   |
  |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| Template Conservation |   |
  |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |
|   |
|   |   |
|   |
|   |
|   |   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |
|   |
|   |   |   |   |   | . |   |   |   |
| Template Sequence |   |
T | T | P | P | S | V | Y | P | L | A | P | G | S | A | A | A | A | A | S | M | V | T | L | G | C | L | V | K | G | Y | F | P | E | P | V | T | V | T | W | N | S | G | S | L | A | A | G | . |
. |
. |
V | H | T | F | P | A | V | L | Q | A | A | L | Y | T | L | S | S | S | V | T | V | P | S | S | S | W | . |
P | S | E |
| Template Known Secondary structure |   |
| B |
|
|  |  |  |  |  |
|
|
| T | T |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  | B | S | S |
|
|  |  |  |  | G | G | G | T |
|
| T | T | . | . | . |  |  |  |
|
|
|  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | . | T | T | S |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
| . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . |
|   |
|   |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | Y | S | C | R | V | T | H | E | G | S | T | V | E | K | T | V | A | P | A | E | C | S |
| Query Conservation |   |
  |
|
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |
| Template Sequence |   |
T | V | T | C | N | V | A | H | P | A | S | S | T | K | V | D | K | K | I | V | P | R | A |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |
|
|
|
|
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|