Job Description A0M8Q6 Confidence 99.82% Date Thu Apr 26 09:16:38 BST 2012 Rank 485 Aligned Residues 93 % Identity 24% Template c3tzvD_ PDB info PDB header:immune system Chain: D: PDB Molecule:beta-2-microglobulin; PDBTitle: crystal structure of an inkt tcr in complex with cd1d-2 lysophosphatidylcholine Resolution 3.06 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	V	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	G	S	P	V	K	V	G	V	E	T	T	K	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K	S	H	R
Query Conservation
Alig confidence															.																																	.																											.	.	.	.
Template Conservation															.																																	.																											.	.	.	.
Template Sequence		Q	R	T	P	K	I	Q	V	Y	S	R	H	P	.	A	E	N	G	K	S	N	F	L	N	C	Y	V	S	G	F	H	P	S	D	I	E	V	D	L	L	K	N	G	E	R	I	.	E	K	V	E	H	S	D	L	S	F	S	K	D	W	S	F	Y	L	L	Y	Y	T	E	F	T	P	.	.	.	.	T	E	D
Template Known Secondary structure												S	S		.			T	T	S												S	S	S									S	S		B		.	S											T	T	S													.	.	.	.
Template Predicted Secondary structure															.																																	.																											.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	S	C	R	V	T	H	E	G	S	T	V	E	K	T	V	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	A	C	R	V	N	H	V	T	L	S	Q	P	K	I	V	K	W
Template Known Secondary structure										T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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