Job Description A0M8Q6 Confidence 99.84% Date Thu Apr 26 09:16:38 BST 2012 Rank 162 Aligned Residues 98 % Identity 20% Template c3rgvD_ PDB info PDB header:immune system Chain: D: PDB Molecule:beta-2-microglobulin; PDBTitle: a single tcr bound to mhci and mhc ii reveals switchable tcr2 conformers Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	V	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	G	S	P	V	K	V	G	V	E	T	T	K	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K	S
Query Conservation
Alig confidence																	.																																			.																											.	.	.
Template Conservation																	.																																			.																											.	.	.
Template Sequence		G	I	Q	K	T	P	Q	I	Q	V	Y	S	R	H	P	.	P	E	N	G	K	P	N	I	L	N	C	Y	V	T	Q	F	H	P	P	H	I	E	I	Q	M	L	K	N	G	K	K	I	P	K	.	V	E	M	S	D	M	S	F	S	K	D	W	S	F	Y	I	L	A	H	T	E	F	T	P	T	E	.	.	.
Template Known Secondary structure														S	S		.			T	T	S												S	S	S									T	T				S		.										T	T	S														S	.	.	.
Template Predicted Secondary structure																	.																																			.																											.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	S	Y	S	C	R	V	T	H	E	G	S	T	V	E	K	T	V	A	P	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	T	Y	A	C	R	V	K	H	D	S	M	A	E	P	K	T	V	Y	W	D	R
Template Known Secondary structure		S										T	T	S	S	S								T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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