Job Description A0M8Q6 Confidence 99.85% Date Thu Apr 26 09:16:38 BST 2012 Rank 62 Aligned Residues 95 % Identity 24% Template c3p73A_ PDB info PDB header:immune system Chain: A: PDB Molecule:mhc rfp-y class i alpha chain; PDBTitle: crystal structures of the chicken yf1*7.1 molecule Resolution 1.32 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	V	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	G	S	P	V	K	V	G	V	E	T	T	K	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K	S	H
Query Conservation
Alig confidence																.	.	.	.																																																														.
Template Conservation																.	.	.	.																																																														.
Template Sequence		R	R	V	Q	P	E	V	R	V	W	G	K	E	A	.	.	.	.	D	G	I	L	T	L	S	C	H	A	H	G	F	Y	P	R	P	I	T	I	S	W	M	K	D	G	M	V	R	D	Q	E	T	R	W	G	G	I	V	P	N	S	D	G	T	Y	H	A	S	A	A	I	D	V	L	P	E	D	G	D	K	.
Template Known Secondary structure				B												.	.	.	.	T	T												B	S	S									T	T				G	G	G										T	T	S												G	G	G	G	G	G	.
Template Predicted Secondary structure																.	.	.	.																																																														.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	Y	S	C	R	V	T	H	E	G	S	T	V	E	K	T	V	A	P	A	E
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Y	W	C	R	V	E	H	A	S	L	P	Q	P	G	L	F	S	W	E	P
Template Known Secondary structure		.	.								T	T	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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