Job Description A0M8Q6 Confidence 99.83% Date Thu Apr 26 09:16:38 BST 2012 Rank 365 Aligned Residues 99 % Identity 20% Template c2zsvA_ PDB info PDB header:immune system Chain: A: PDB Molecule:h-2 class i histocompatibility antigen, k-b alpha chain; PDBTitle: crystal structure of h-2kb in complex with jhmv epitope s598 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	P	K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	V	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	G	S	P	V	K	V	G	V	E	T	T	K	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		G	N	R	T	D	S	P	K	A	H	V	T	H	H	.	.	.	S	R	P	E	D	K	V	T	L	R	C	W	A	L	G	F	Y	P	A	D	I	T	L	T	W	Q	L	N	G	E	E	L	I	Q	D	M	E	L	V	E	T	R	P	A	G	D	G	T	F	Q	K	W	A	S	V	V	V	P	L	G	K	E	Q
Template Known Secondary structure						B										.	.	.			T	T	T												B	S	S									T	T					T	T										S	S	S												T	T		G	G
Template Predicted Secondary structure																.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		S	H	R	S	Y	S	C	R	V	T	H	E	G	S	T	V	E	K	T	V	A	P	A	E	.	.	C
Query Conservation																										.	.
Alig confidence			.	.	.																					.	.
Template Conservation			.	.	.
Template Sequence		Y	.	.	.	Y	T	C	H	V	Y	H	Q	G	L	P	E	P	L	T	L	R	W	E	P	P	P	C
Template Known Secondary structure		G	.	.	.								T	T		S	S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		256				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions