Job Description A0M8Q6 Confidence 99.82% Date Thu Apr 26 09:16:38 BST 2012 Rank 457 Aligned Residues 92 % Identity 21% Template c1je6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:mhc class i chain-related protein; PDBTitle: structure of the mhc class i homolog micb Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		P	K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	V	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	G	S	P	V	K	V	G	V	E	T	.	T	K	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K	S
Query Conservation																																																							.
Alig confidence																.	.	.																																					.
Template Conservation																.	.	.
Template Sequence		R	T	V	P	P	M	V	N	V	T	C	S	E	V	.	.	.	S	E	G	N	I	T	V	T	C	R	A	S	S	F	Y	P	R	N	I	T	L	T	W	R	Q	D	G	V	S	L	S	H	N	T	Q	Q	W	G	D	V	L	P	D	G	N	G	T	Y	Q	T	W	V	A	T	R	I	R	Q	G	E	E	Q	R
Template Known Secondary structure		G		B												.	.	.		S	S												B	S	S									T	T					T	T	S	S							B		S	T	T												T	T		G	G	G
Template Predicted Secondary structure																.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	S	Y	S	C	R	V	T	H	E	G	S	T	V	E	K	T	V
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	F	T	C	Y	M	E	H	S	G	N	H	G	T	H	P	V
Template Known Secondary structure		.	.	.								T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions