Job Description A0M8Q6 Confidence 99.81% Date Thu Apr 26 09:16:38 BST 2012 Rank 493 Aligned Residues 97 % Identity 24% Template c1gzpA_ PDB info PDB header:glycoprotein Chain: A: PDB Molecule:t-cell surface glycoprotein cd1b; PDBTitle: cd1b in complex with gm2 ganglioside Resolution 2.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	V	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	G	S	P	V	K	V	G	V	E	T	T	K	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K	S
Query Conservation
Alig confidence																			.	.																														.
Template Conservation																			.	.																														.
Template Sequence		Q	R	Q	V	K	P	E	A	W	L	S	S	G	P	S	P	G	.	.	P	G	R	L	Q	L	V	C	H	V	S	G	F	Y	P	K	P	V	W	V	M	W	M	R	G	E	Q	E	Q	.	Q	G	T	Q	L	G	D	I	L	P	N	A	N	W	T	W	Y	L	R	A	T	L	D	V	A	D	G	E	A	A	G
Template Known Secondary structure		T			B												S	S	.	.	T	T										S		B	S	S									T	T				.	T	T										T	T	T												G	G	G	G	T	T
Template Predicted Secondary structure																			.	.																														.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		H	R	S	Y	S	C	R	V	T	H	E	G	S	T	.	V	E	K	T	V	A	P	A	E
Query Conservation																.
Alig confidence		.	.	.												.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	S	C	R	V	K	H	S	S	L	E	G	Q	D	I	I	L	Y	W	G	P
Template Known Secondary structure		.	.	.								T	T	T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions