Job Description A0M8Q6 Confidence 99.89% Date Thu Apr 26 09:16:38 BST 2012 Rank 26 Aligned Residues 97 % Identity 31% Template c1cqkA_ PDB info PDB header:immune system Chain: A: PDB Molecule:ch3 domain of mak33 antibody; PDBTitle: crystal structure of the ch3 domain from the mak33 antibody Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	V	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	G	S	P	V	K	V	G	V	E	T	T	K	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K	S	H	R
Query Conservation
Alig confidence																																																		.
Template Conservation																																																		.
Template Sequence		P	A	A	P	Q	V	Y	T	I	P	P	P	L	E	Q	M	A	K	D	L	V	S	L	T	C	M	I	T	D	F	F	P	E	D	I	T	V	E	W	Q	W	N	G	Q	P	A	E	N	.	Y	K	N	T	Q	P	I	M	D	T	D	G	S	Y	F	V	Y	S	K	L	N	V	Q	K	S	N	W	E	A	G	N
Template Known Secondary structure			B											G	G	G	T	T	S	S												B	S	S									T	T					S	.										T	T	S																	T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		84	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		S	Y	S	C	R	V	T	H	E	G	S	.	.	.	T	V	E	K	T	V	A
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		T	F	T	C	S	V	L	H	E	G	L	H	N	H	H	T	E	K	S	L	S
Template Known Secondary structure										T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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