Job Description A0M8Q6 Confidence 99.82% Date Thu Apr 26 09:16:38 BST 2012 Rank 436 Aligned Residues 95 % Identity 21% Template c1cd1C_ PDB info PDB header:cd1 Chain: C: PDB Molecule:cd1; PDBTitle: cd1(mouse) antigen presenting molecule Resolution 2.67 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	K	A	A	P	S	V	T	L	F	P	P	S	S	E	E	L	Q	A	N	K	A	T	L	V	C	L	V	S	D	F	Y	P	G	A	V	T	V	A	W	K	A	D	G	S	P	V	K	V	G	V	E	T	T	K	P	S	K	Q	S	N	N	K	Y	A	A	S	S	Y	L	S	L	T	P	E	Q	W	K	S
Query Conservation
Alig confidence													.	.																																				.																													.	.	.
Template Conservation													.	.																																				.																													.	.	.
Template Sequence		E	K	Q	E	K	P	V	A	W	L	S	.	.	S	V	P	S	S	A	H	G	H	R	Q	L	V	C	H	V	S	G	F	Y	P	K	P	V	W	V	M	W	M	R	G	D	Q	E	Q	.	Q	G	T	H	R	G	D	F	L	P	N	A	D	E	T	W	Y	L	Q	A	T	L	D	V	E	A	G	E	.	.	.
Template Known Secondary structure		T			B								.	.					S	S	S	S												B	S	S									T	T				.	T	T										T	T	S												S	S	S	.	.	.
Template Predicted Secondary structure													.	.																																				.																													.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		H	R	S	Y	S	C	R	V	T	H	E	G	S	.	T	V	E	K	T	V	A	P
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		E	A	G	L	A	C	R	V	K	H	S	S	L	G	G	Q	D	I	I	L	Y	W
Template Known Secondary structure			S	S								T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions