 |
| Job Description | Q8NBR0 | | Confidence | 2.41% | Date | Wed Jun 6 09:32:45 BST 2012 |
| Rank | 100 | Aligned Residues | 27 |
| % Identity | 22% | Template | d1fsha_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| DEP domain
|
| Resolution | UNK |
|
|   |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | W | A | A | H | W | L | M | R | R | R | R | R | K | Q | R | K | K | K | A | W | I | Y | C | E | S | L |
| Query Conservation |   |
  |   |
|   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|   |
|
| Template Sequence |   |
A | D | V | V | D | W | L | Y | T | H | V | E | G | F | K | E | R | R | E | A | R | K | Y | A | S | S | M |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|