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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank41Aligned Residues238
% Identity24%Templatec3q5iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase; PDBTitle: crystal structure of pbanka_031420
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   366...370.........380.. .......390.........400.........410.........420.........430.........440....
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Query Sequence  VQEIGSGQFGLVHLGYW. LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS
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Template Sequence  FKVRKLGSYGEVLLCKEKNGHSEKAIKVIKKKF. . HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF
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TTT



T..T


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TT
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   58.60.........70.........80.........90 .........100.........110.........120.........130.....
 
   445....450.........460.........470.........480.........490 .........500.........510.........520.
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Query Sequence  DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV. . . GENQVIKVSDFGMTRFVLDDQYTSSTGTKFP
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Template Sequence  EQIINRHK. FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL. . GT
Template Known Secondary structure  S
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SGGGSSTT

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   154.....160. ........170.........180.........190.........200.........210.........220........ .230
 
   522.......530.........540.........550.........560.........570.........580. ........590........
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Query Sequence  VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPR. . . LASTHVYQIMNHCWKER
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Template Sequence  AYYIAPEVLKK. KYNEKCDVWSCGVIMYILLC. GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYD
Template Known Secondary structure  TTT

TT.
B
T.SS
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   231........240. ........250.........260. ........270.........280.........290.........300........
 
   599600.........610
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Query Sequence  PEDRPAFSRLLR
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Template Sequence  YNKRCTAEEALN
Template Known Secondary structure  TTTS

T
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   309310.........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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