Job Description Q08881 Confidence 99.85% Date Tue Apr 3 14:36:05 BST 2012 Rank 312 Aligned Residues 148 % Identity 21% Template c3ps5A_ PDB info PDB header:hydrolase, signaling protein Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 6; PDBTitle: crystal structure of the full-length human protein tyrosine2 phosphatase shp-1 Resolution 3.10 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.																						220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	I	A	L	Y	D	Y	Q	T	N	D	P	Q	E	L	A	L	R	R	N	E	E	Y	C	L	L	D	.	S	S	E	I	H	W	W	R	V	Q	D	R	N	G	H	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	P	S	S	Y	L	V	E	K	S	P	N
Query Conservation																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																																																																																.	.
Template Sequence		S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	G	D	Q	V	T	H	I	R	I	Q	N	S	G	D	F	Y	D	L	Y	G	G	E	K	F	A	T	L	T	E	L	V	E	Y	Y	T	Q	Q	Q	G	V	L	Q	D	R	D	G	T	I	I	H	L	K	Y	P	L	N	C	S	.	.
Template Known Secondary structure									S	S	S	T	T	S								T	T											S	S				S	S	S	S			B	S	S										T	T	S	S			B		S	S			B						B					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.													.	.
Query SS confidence																																							.													.	.
Query Sequence		N	L	E	T	Y	E	W	Y	N	K	S	I	S	R	D	K	A	E	K	L	L	L	D	T	G	K	E	G	A	F	M	V	R	D	S	R	T	.	A	G	T	Y	T	V	S	V	F	T	K	A	.	.	V	V	S	E	N	N	P	C	I	K	H	Y	H	I	K	E	T	N	D	N	P	K	R	Y	Y	V	A	E
Query Conservation																																							.													.	.
Alig confidence																																							.													.	.																					.	.	.
Template Conservation																																																																										.	.	.
Template Sequence		D	P	T	S	E	R	W	Y	H	G	H	M	S	G	G	Q	A	E	T	L	L	Q	A	K	G	E	P	W	T	F	L	V	R	E	S	L	S	Q	P	G	D	F	V	L	S	V	L	S	D	Q	P	K	A	G	P	G	S	P	L	R	V	T	H	I	K	V	M	C	E	G	G	R	.	.	.	Y	T	V	G	G
Template Known Secondary structure			S			S	T	T				S																T	T								S	S	S	T	T												S	S	S	T	T	S										B		G	G	G		.	.	.	B	B	S	S	S
Template Predicted Secondary structure																																																																										.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	V	F	D	S	I	P	L	L	I	N	Y	H	Q	H	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	T	F	D	S	L	T	D	L	V	E	H	F	K	K	T	G
Template Known Secondary structure		S			B	S	S											S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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