Job Description Q08881 Confidence 99.24% Date Tue Apr 3 14:36:05 BST 2012 Rank 442 Aligned Residues 99 % Identity 19% Template c3ml4D_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:protein dok-7; PDBTitle: crystal structure of a complex between dok7 ph-ptb and the musk2 juxtamembrane region Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.									.	.	.
Query SS confidence																																			.	.	.	.	.	.									.	.	.
Query Sequence		I	L	L	E	E	Q	L	I	K	K	S	Q	Q	K	R	R	T	S	P	S	N	F	K	V	R	F	F	V	L	T	K	A	S	.	.	.	.	.	.	L	A	Y	F	E	D	R	H	.	.	.	G	K	K	R	T	L	K	G	S	I	E	L	S	R	I	K	C	V	E	I	V	K	S	D	I	S	I	P	C	H
Query Conservation																																			.	.	.	.	.	.									.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.															.	.	.	.	.	.									.	.	.																										.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.																																																									.	.	.	.
Template Sequence		A	L	V	E	G	Q	V	K	L	R	.	.	.	.	.	.	.	.	.	D	K	W	K	S	R	W	L	V	L	R	K	P	S	P	V	A	D	C	L	L	X	L	V	Y	K	D	K	C	E	R	S	K	G	L	R	E	R	S	S	L	T	L	E	D	I	C	G	L	E	P	A	L	P	Y	E	.	.	.	.	G
Template Known Secondary structure			S									.	.	.	.	.	.	.	.	.													S	S	S	S	S	S								S	S						T	T				S							S											T	.	.	.	.	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																																									.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.										.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	Y	P	F	Q	V	V	H	D	N	Y	L	L	Y	V	F	A	P	D	R	E	S	R	Q	R	W	V	L	A	L	K	E	E	T	R	N	N	N	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	H	T	L	A	I	I	C	L	S	Q	A	V	X	L	G	F	D	S	H	E	A	X	C	A	W	D	T	R	I	R	Y	A	L	G	E	V	H	R	F
Template Known Secondary structure											S	S								S	S															T	S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions