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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank62Aligned Residues240
% Identity25%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380... ......390.........400.........410.........420.........430.........
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Query Sequence  SELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME
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Template Sequence  EMYQRVKKLG. . . SGEVLLCRDKVTHVERAIKIIRKSSN. . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK
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   60......... 70.........80.........90..... ....100.........110.........120.........130....
 
   440.........450.........460.........470.........480.........490 .........500.........510......
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Query Sequence  HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV. . . GENQVIKVSDFGMTRFVLDDQYTSST
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Template Sequence  GGELFDEIIHRMK. FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER
Template Known Secondary structure  S
BSS.

TT
S

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TT

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B


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   143......150..... ....160.........170.........180.........190.........200.........210.........220.
 
   517..520.........530.........540.........550.........560.........570..... ....580.........590...
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Query Sequence  GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF. . . RLYKPRLASTHVYQIMNH
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Template Sequence  . . LGTAYYIAPEVLRK. KYDEKCDVWSIGVILFILLA. GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ
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   222.......230..... ....240.........250..... ....260.........270.........280.........290.......
 
   594.....600.........610
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Query Sequence  CWKERPEDRPAFSRLLR
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Template Sequence  MLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   298.300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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