Job Description Q08881 Confidence 100.00% Date Tue Apr 3 14:36:05 BST 2012 Rank 213 Aligned Residues 254 % Identity 24% Template c3kmuA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo) Resolution 1.80 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.				.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																																																.	.	.																														.	.
Query SS confidence																																																.	.	.																														.	.
Query Sequence		W	V	I	D	P	S	E	L	T	F	V	Q	E	I	G	S	G	Q	F	G	L	V	H	L	G	Y	W	L	N	K	D	K	V	A	I	K	T	I	R	E	G	A	M	S	E	E	.	.	.	D	F	I	E	E	A	E	V	M	M	K	L	S	H	P	K	L	V	Q	L	Y	G	V	C	L	E	Q	A	P	.	.
Query Conservation																																																.	.	.																														.	.
Alig confidence																														.																		.	.	.																														.	.
Template Conservation																														.
Template Sequence		S	G	I	D	F	K	Q	L	N	F	L	T	K	L	N	E	N	H	S	G	E	L	W	K	G	R	W	Q	.	G	N	D	I	V	V	K	V	L	K	V	R	D	W	S	T	R	K	S	R	D	F	N	E	E	C	P	R	L	R	I	F	S	H	P	N	V	L	P	V	L	G	A	C	Q	S	P	P	A	P	H
Template Known Secondary structure						G	G	G											T	T									T	.	T											T	T													G	G	G	G				S		T	T										T	T	T	S	S	S
Template Predicted Secondary structure																														.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.			.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure																								.																										.	.
Query SS confidence																								.																										.	.
Query Sequence		I	C	L	V	F	E	F	M	E	H	G	C	L	S	D	Y	L	R	T	Q	R	G	.	L	F	A	A	E	T	L	L	G	M	C	L	D	V	C	E	G	M	A	Y	L	E	E	A	C	.	.	V	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	Q	V	I	K	V	S	D	F	G	M	T	R	F	V
Query Conservation																								.																										.	.
Alig confidence																								.																										.	.
Template Conservation
Template Sequence		P	T	L	I	T	H	W	X	P	Y	G	S	L	Y	N	V	L	H	E	G	T	N	F	V	V	D	Q	S	Q	A	V	K	F	A	L	D	X	A	R	G	X	A	F	L	H	T	L	E	P	L	I	P	R	H	A	L	N	S	R	S	V	X	I	D	E	D	X	T	A	R	I	S	X	A	D	V	K	F	S	F
Template Known Secondary structure										T	T		B							S		S	S																							T	T	S	S	S			T	T				S	G	G	G					T	T	S						G	G	G	S			T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.				.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.		.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure																													.	.	.																																						.
Query SS confidence																													.	.	.																																						.
Query Sequence		L	D	D	Q	Y	T	S	S	T	G	T	K	F	P	V	K	W	A	S	P	E	V	F	S	F	S	R	.	.	.	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	S	E	G	K	I	P	Y	E	N	R	S	N	S	E	V	V	E	D	I	.	S	T	G	F	R	L	Y	K	P	R	L	A
Query Conservation																													.	.	.																																						.
Alig confidence												.	.	.	.	.	.												.	.	.																				.																		.
Template Conservation												.	.	.	.	.	.																																		.
Template Sequence		Q	S	P	G	R	X	Y	A	P	A	.	.	.	.	.	.	W	V	A	P	E	A	L	Q	K	K	P	E	D	T	N	R	R	S	A	D	X	W	S	F	A	V	L	L	W	E	L	V	T	.	R	E	V	P	F	A	D	L	S	N	X	E	I	G	X	K	V	A	L	E	G	L	R	P	T	I	P	P	G	I
Template Known Secondary structure		S		T	T			S		G	G	.	.	.	.	.	.	G	S							S		G	G	G	S																				.		S		T	T	T	T	S												S								T	T
Template Predicted Secondary structure												.	.	.	.	.	.																																		.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.							.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	H	V	Y	Q	I	M	N	H	C	W	K	E	R	P	E	D	R	P	A	F	S	R	L	L	R	Q	L	A	E	I	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	H	V	S	K	L	X	K	I	C	X	N	E	D	P	A	K	R	P	K	F	D	X	I	V	P	I	L	E	K	X	Q	D
Template Known Secondary structure													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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