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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank153Aligned Residues238
% Identity25%Templatec3igoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of cryptosporidium parvum cdpk1, cgd3_920
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380... ......390.... .....400.........410.........420.........430.......
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Query Sequence  SELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIR. . EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF
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Template Sequence  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL
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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   438.440.........450.........460.........470.........480.........490 .........500.........510....
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Query Sequence  MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV. . . GENQVIKVSDFGMTRFVLDDQYTS
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Template Sequence  YTGGELFDEIIKRKR. FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTT. .
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   155....160......... 170.........180.........190.........200.........210.........220.........230.
 
   515....520.........530.........540.........550.........560.........570..... ....580.........590.
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Query Sequence  STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF. . . RLYKPRLASTHVYQIM
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Template Sequence  . . . . . . . . AYYIAPEVLRGTYDEKCDVWSAGVILYILLS. GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI
Template Known Secondary structure  ........GGG

GGGGGT


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   239240.........250.........260......... 270.........280.........290.........300.........
 
   592.......600.........610
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Query Sequence  NHCWKERPEDRPAFSRLLR
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Template Sequence  RKMLTFHPSLRITATQCLE
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   310.........320........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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