Return to main results Retrieve Phyre Job Id

Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank176Aligned Residues236
% Identity22%Templatec3fmeA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity mitogen-activated protein kinase kinase 6; PDBTitle: crystal structure of human mitogen-activated protein kinase kinase 62 (mek6) activated mutant (s207d, t211d)
Resolution2.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   357..360.........370.........380... ......390.........400.........410.........420.........430.....
Predicted Secondary structure 




.















Query SS confidence 


























.



















































Query Sequence  VIDPSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF
Query Conservation 

          

 
 

 
  
   .    



           
  
   
  
 
 


 
 
         

 
Alig confidence 


























.



















































Template Conservation   
  
 
     

 
 

 
           



 
           
    
  
 
 


              
 
Template Sequence  EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM
Template Known Secondary structure 


GGG
SSTTTT

TT


TTB


SSS
Template Predicted Secondary structure 




























Template SS confidence 















































































   47..50.........60.........70.........80.........90.........100.........110.........120......
 
   436...440......... 450.........460.........470.... .....480.........490.........500.........510..
Predicted Secondary structure 





..





.
























Query SS confidence 













. .
























.





































Query Sequence  EFMEHGCLSDYLRT. . QRGLFAAETLLGMCLDVCEGMAYLE. EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY
Query Conservation 
    


   
  ..    
       
  


 

 


.   





   



      

 





       
Alig confidence 













..
























.































......
Template Conservation 
                                                                
 
      ......
Template Sequence  ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFAGCKP. . . . . .
Template Known Secondary structure 

STT



S






SGGG

TT

B







......
Template Predicted Secondary structure 































......
Template SS confidence 















































































   130.........140.........150.........160.........170.........180.........190.........200...
 
   513......520.........530... ......540.........550.........560... ......570.........580........
Predicted Secondary structure 









..












..











Query SS confidence 




















. .





























. .
























Query Sequence  TSSTGTKFPVKWASPEVFSFS. . RYSSKSDVWSFGVLMWEVFSEGKIPYENRS. . NSEVVEDISTGFRLYKPRLASTHVY
Query Conservation               


 
   ..  
 










 

 
 
  
     ..       
  
     
      
 
Alig confidence  ...........









..



















.








..
























Template Conservation  ...........                  





 






.
  

                          
    
Template Sequence  . . . . . . . . . . . YMAPERINPELNQYSVKSDIWSLGITMIELAI. LRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFV
Template Known Secondary structure  ...........
S
S

TT


.TS
SS


S
S





TTTS
Template Predicted Secondary structure  ...........

















.


















Template SS confidence 















































































   219220.........230.........240.........250 .........260.........270.........280......
 
   589590.........600.........610
Predicted Secondary structure 






Query SS confidence 





















Query Sequence  QIMNHCWKERPEDRPAFSRLLR
Query Conservation   

  
   

  


   
  
Alig confidence 





















Template Conservation   

   
  

  
 
  


 
Template Sequence  DFTSQCLKKNSKERPTYPELMQ
Template Known Secondary structure  T
SSGGGS

TT
Template Predicted Secondary structure 







Template SS confidence 





















   289290.........300.........310
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions