Job Description Q08881 Confidence 100.00% Date Tue Apr 3 14:36:05 BST 2012 Rank 64 Aligned Residues 238 % Identity 23% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

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		367	.	.	370	.	.	.	.	.	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure												.																																						.
Query SS confidence												.																																						.
Query Sequence		Q	E	I	G	S	G	Q	F	G	L	.	V	H	L	G	Y	W	L	N	K	D	K	V	A	I	K	T	I	R	E	G	A	M	S	E	E	D	F	I	E	E	A	E	V	M	M	K	L	.	S	H	P	K	L	V	Q	L	Y	G	V	C	L	E	Q	A	P	I	C	L	V	F	E	F	M	E	H	G	C	L	S
Query Conservation												.																																						.
Alig confidence												.							.															.	.															.																											.
Template Conservation																			.															.	.																																										.
Template Sequence		K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	F	.	Q	G	R	P	V	A	V	K	R	M	L	I	D	F	.	.	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	Y	C	S	E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	.	L	N	L	Q
Template Known Secondary structure								T	T	T								S	.	S	S										G	G	G	.	.															T	T	S	T	T	B										T	T										S	.
Template Predicted Secondary structure																			.															.	.																																										.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.		.	.	.	.	.	700	.	.	.	.	.	.	.	.			.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.		750	.	.	.
		445	.	.	.	.	450	.	.	.							.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.														.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	L	R	T	Q	R	G	L	.	.	.	.	.	.	F	A	A	E	T	L	L	G	M	C	L	D	V	C	E	G	M	A	Y	L	E	E	A	C	V	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	V	S	D	F	G	M	T	R
Query Conservation											.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G	V	A	H	L	H	S	L	K	I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F	G	L	C	K
Template Known Secondary structure					T			S		S	T	T						S	S																				T	T							S	T	T	T											S			S	S		S							B				S	S
Template Predicted Secondary structure
Template SS confidence
		754	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.				.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.							.
Predicted Secondary structure																														.	.	.																																											.	.	.	.	.	.
Query SS confidence																														.	.	.																																											.	.	.	.	.	.
Query Sequence		F	V	L	D	D	Q	Y	T	S	S	T	G	T	K	F	P	V	K	W	A	S	P	E	V	F	S	F	S	.	.	.	R	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	S	E	G	K	I	P	Y	E	N	R	S	N	S	E	V	V	E	D	I	S	T	G	F	.	.	.	.	.	.	R
Query Conservation																														.	.	.																																											.	.	.	.	.	.
Alig confidence																														.	.	.																												.	.														.	.	.	.	.	.
Template Conservation																																																												.	.
Template Sequence		K	L	D	S	G	Q	F	R	N	L	N	N	P	S	G	T	S	G	W	R	A	P	E	L	L	E	E	S	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	G	.	.	D	K	Y	S	R	E	S	N	I	I	R	G	I	F	S	L	D	E	M	K
Template Known Secondary structure				T	T	T									S	G	G	G	G	G							S	T	T	T						T																T	T	S			T	T		.	.	S											T								T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		834	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.			.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	K	P	R	L	A	S	T	H	V	Y	Q	I	M	N	H	C	W	K	E	R	P	E	D	R	P	A	F	S	R	L	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K	R	P	T	A	M	K	V	L	R
Template Known Secondary structure		T																		T		S	S	T	T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		943	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions