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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank182Aligned Residues226
% Identity27%Templatec3efwA_
PDB info PDB header:transferase/inhibitorChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   354.....360.........370.........380... ......390.... .....400.........410.........420........
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Query Sequence  GKWVIDPSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIR. . . . EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ
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Template Sequence  RQWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA
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G..GGTTTTT

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S
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   126...130 .........140.........150.........160.........170.........180.........190.........200...
 
   429430.........440.........450.........460.........470.........480.........490.........500........
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Query Sequence  APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL
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Template Sequence  TRVYLILEYAPLGTVYRELQKLSK. FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFL. . . . . .
Template Known Secondary structure  S


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   204.....210.........220....... ..230.........240.........250.........260.........270......
 
   509510.........520.........530.........540.........550.........560.........570.........580........
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Query Sequence  DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY
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Template Sequence  . . . . . . . . . . . . . . DYLPPEMI. . . . . . EKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGAR
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GGGT......

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TT

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   294.....300. ........310........ .320.........330........ .340.........350.
 
   589590.........600.........610
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Query Sequence  QIMNHCWKERPEDRPAFSRLLR
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Template Sequence  DLISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   358.360.........370.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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