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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank169Aligned Residues239
% Identity22%Templatec3dbqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of ttk kinase domain
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   357..360.........370.........380.........390.........400. ........410.... .....420.........430.
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Query Sequence  VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE. . . DFIEEAEVMMKLS. . HPKLVQLYGVCLEQAPI
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Template Sequence  SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI
Template Known Secondary structure  SSS
S

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TT

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TTB


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   519520.........530.........540.........550.........560.........570.........580.........590........
 
   432.......440.........450.........460.........470.........480.........490.........500.........510.
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Query Sequence  CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ
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Template Sequence  YMVMECGN. IDLNSWLKKKKS. IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV. DGMLKLIDFGIANQM. . . .
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   599600...... ...610........ .620.........630.........640.........650...... ...660.........670.
 
   512.......520.........530.........540.........550.........560... ......570.........580.........
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Query Sequence  YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS. . NSEVVEDISTGFRLYKPRLASTHVYQ
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Template Sequence  . . . . . . . VGTVNYMPPEAIKDMSISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD
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   684.....690.........700.........710........ .720.........730.........740.........750.....
 
   590.........600.........610
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Query Sequence  IMNHCWKERPEDRPAFSRLLR
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Template Sequence  VLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
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   767..770.........780.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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