Job Description Q08881 Confidence 100.00% Date Tue Apr 3 14:36:05 BST 2012 Rank 61 Aligned Residues 250 % Identity 29% Template c3d4qA_ PDB info PDB header:transferase Chain: A: PDB Molecule:b-raf proto-oncogene serine/threonine-protein kinase; PDBTitle: pyrazole-based inhibitors of b-raf kinase Resolution 2.80 Å

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		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.				.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		G	K	W	V	I	D	P	S	E	L	T	F	V	Q	E	I	G	S	G	Q	F	G	L	V	H	L	G	Y	W	L	N	K	D	K	V	A	I	K	T	I	R	E	G	A	M	S	E	E	.	.	.	D	F	I	E	E	A	E	V	M	M	K	L	S	H	P	K	L	V	Q	L	Y	G	V	C	L	E	Q	A	P
Query Conservation																																																		.	.	.
Alig confidence																																		.	.															.	.	.																							.
Template Conservation																																		.	.																																								.
Template Sequence		D	D	W	E	I	P	D	G	Q	I	T	V	G	Q	R	I	G	S	G	S	F	G	T	V	Y	K	G	K	W	H	G	D	.	.	V	A	V	K	M	L	N	V	T	A	P	T	P	Q	Q	L	Q	A	F	K	N	E	V	G	V	L	R	K	T	R	H	V	N	I	L	L	F	M	G	.	Y	S	T	K	P	Q
Template Known Secondary structure					B			T	T												T	T								S	S	S		.	.								S	S	S																	T	T				T	T	B						.				S	S	S
Template Predicted Secondary structure																																		.	.																																								.
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.			480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	L	V	F	E	F	M	E	H	G	C	L	S	D	Y	L	R	T	Q	R	G	L	F	A	A	E	T	L	L	G	M	C	L	D	V	C	E	G	M	A	Y	L	E	E	A	C	V	I	H	R	D	L	A	A	R	N	C	L	V	G	E	N	Q	V	I	K	V	S	D	F	G	M	T	R	F	V	L	D	D
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		L	A	I	V	T	Q	W	C	E	G	S	S	L	Y	H	H	L	H	I	I	E	T	K	F	E	M	I	K	L	I	D	I	A	R	Q	T	A	Q	G	M	D	Y	L	H	A	K	S	I	I	H	R	D	L	K	S	N	N	I	F	L	H	E	D	L	T	V	K	I	G	D	F	G	L	A	T	V	L	S	G	.
Template Known Secondary structure										S	S		B							T	S																										T	T		B		S			S	G	G	G					T	T	T								T	T		B					.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.				.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.	.					.	580	.	.
Predicted Secondary structure																										.	.	.																																	.													.	.	.	.
Query SS confidence																										.	.	.																																	.													.	.	.	.
Query Sequence		Q	Y	T	S	S	T	G	T	K	F	P	V	K	W	A	S	P	E	V	F	S	F	S	R	.	.	.	Y	S	S	K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	S	E	G	K	I	P	Y	E	N	R	S	N	S	E	.	V	V	E	D	I	S	T	G	F	R	L	Y	.	.	.	.	K	P	R	L
Query Conservation																										.	.	.																																	.													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.															.	.	.																				.													.													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	S	I	L	W	M	A	P	E	V	I	R	M	Q	D	K	N	P	Y	S	F	Q	S	D	V	Y	A	F	G	I	V	L	Y	E	L	M	T	.	G	Q	L	P	Y	S	N	I	N	N	R	D	Q	I	I	F	M	V	G	R	G	Y	L	S	P	D	L	S	K	V	R	S	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			T	T							T	T		S	S				S																		.	S	S		T	T	T	T														T	S					G	G	G	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
												616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.		.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	T	H	V	Y	Q	I	M	N	H	C	W	K	E	R	P	E	D	R	P	A	F	S	R	L	L	R	Q	L	A	E	I	A	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	P	K	A	M	K	R	L	M	A	E	C	L	K	K	K	R	D	E	R	P	L	F	P	Q	I	L	A	S	I	E	L	L	A	R	S
Template Known Secondary structure		S												T		S	S	G	G	G	S																T
Template Predicted Secondary structure
Template SS confidence
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions