Job Description Q08881 Confidence 99.66% Date Tue Apr 3 14:36:05 BST 2012 Rank 373 Aligned Residues 97 % Identity 18% Template c3a8qB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: low-resolution crystal structure of the tiam2 phccex domain Resolution 3.20 Å

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		5	.	.	.	.	10	.	.	.	.							.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.					.
Query SS confidence												.	.	.	.	.	.					.
Query Sequence		I	L	L	E	E	Q	L	I	K	K	.	.	.	.	.	.	S	Q	Q	K	.	R	R	T	S	P	S	N	F	K	V	R	F	F	V	L	T	K	A	S	L	A	Y	F	E	D	R	H	G	K	K	R	T	L	K	G	S	I	E	L	S	R	I	K	C	V	E	I	V	K	S	D	I	S	I	P	C	H	Y	K
Query Conservation												.	.	.	.	.	.					.
Alig confidence												.	.	.	.	.	.					.																													.	.	.	.												.									.	.	.	.
Template Conservation																																																			.	.	.	.												.									.	.	.	.
Template Sequence		V	R	K	A	G	W	L	F	F	K	P	L	V	T	L	Q	K	E	R	K	L	E	L	V	A	R	R	K	W	K	Q	Y	W	V	T	L	K	G	C	T	L	L	F	Y	E	T	Y	S	A	.	.	.	.	P	R	C	A	L	F	A	E	D	S	I	.	V	Q	S	V	P	E	H	P	.	.	.	.	K	K	E
Template Known Secondary structure														B				T	T	T																			T	T						S					.	.	.	.		S						T	T			.					T	T		S	.	.	.	.	S		S
Template Predicted Secondary structure																																																			.	.	.	.												.									.	.	.	.
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.					.	.	.	.	.	.	560	.	.	.	.		.	.	.	.	.	570	.	.					.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		Y	P	F	Q	V	V	H	D	N	Y	L	L	Y	V	F	.	A	P	D	R	E	S	R	Q	R	W	V	L	A	L	K	E	E	T
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		H	V	F	C	L	S	N	S	C	G	D	V	Y	L	F	Q	A	T	S	Q	T	D	L	E	N	W	V	T	A	I	H	S	A	C
Template Known Secondary structure		S							T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		584	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions