Job Description Q08881 Confidence 99.60% Date Tue Apr 3 14:36:05 BST 2012 Rank 397 Aligned Residues 98 % Identity 14% Template c3a8nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: crystal structure of the tiam1 phccex domain Resolution 4.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		F	I	L	L	E	E	Q	L	I	K	K	S	.	.	.	.	.	.	.	Q	Q	K	R	R	T	S	P	S	N	F	K	V	R	F	F	V	L	T	K	A	S	L	A	Y	F	E	D	R	H	G	K	K	R	T	L	K	G	S	I	E	L	S	R	I	K	C	V	E	I	V	K	S	D	I	S	I	P	C	H	Y
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.																																.	.	.	.												.									.	.	.	.
Template Conservation																																																				.	.	.	.												.									.	.	.	.
Template Sequence		T	V	R	K	A	G	A	L	A	V	K	N	F	L	V	H	K	K	N	K	K	V	E	S	A	T	R	R	K	W	K	H	Y	W	V	S	L	K	G	C	T	L	F	F	Y	E	T	D	S	V	.	.	.	.	P	K	H	A	V	W	V	E	N	S	I	.	V	Q	A	V	P	E	H	P	.	.	.	.	K	K
Template Known Secondary structure				S															T	T	T																			T	T					B						.	.	.	.		S	S			B			S			.					T	T	S	S	.	.	.	.	S	S
Template Predicted Secondary structure																																																				.	.	.	.												.									.	.	.	.
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.					.	.	.	.	.	.	.	490	.	.	.		.	.	.	.	.	.	500	.					.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		K	Y	P	F	Q	V	V	H	D	N	Y	L	L	Y	V	F	.	A	P	D	R	E	S	R	Q	R	W	V	L	A	L	K	E	E	T
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		D	F	V	F	C	L	S	N	S	L	G	D	A	F	L	F	Q	T	T	S	Q	T	E	L	E	N	W	I	T	A	I	H	S	A	C
Template Known Secondary structure			S							T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions