Job Description Q08881 Confidence 99.36% Date Tue Apr 3 14:36:05 BST 2012 Rank 436 Aligned Residues 86 % Identity 16% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	S	P	N	N	L	E	T	Y	E	W	Y	N	K	S	I	S	R	D	K	A	E	K	L	L	L	D	T	G	K	E	G	A	F	M	V	R	D	S	R	T	A	G	T	Y	T	V	S	V	F	T	K	A	V	V	S	E	N	N	P	C	I	K	H	Y	H	I	K	E	T	N	D	N	P	K	R	Y	Y	V
Query Conservation
Alig confidence																.														.	.																								.	.	.	.	.	.														.	.	.	.
Template Conservation																.														.	.																								.	.	.	.	.	.														.	.	.	.
Template Sequence		K	Y	T	N	P	R	F	Y	K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	S	T	D	D	F	L	I	R	K	G	S	R	H	G	Y	C	V	L	V	I	K	F	A	.	.	.	.	.	.	S	D	V	F	V	H	M	K	I	E	E	H	S	.	.	.	.	E	H	Y	T
Template Known Secondary structure			S	S			G	G	G	G	S	T	T			.														.	.	S	S									S	S	T	T										.	.	.	.	.	.	T	T											S	.	.	.	.	S
Template Predicted Secondary structure																.														.	.																								.	.	.	.	.	.														.	.	.	.
Template SS confidence
		783	.	.	.	.	.	.	790	.	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.			810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.							.	.	.	.	.	.	.	840	.	.	.	.	.					.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	K	Y	V	F	D	S	I	P	L	L	I	N	Y	H	Q	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y	V	R	P
Template Known Secondary structure			T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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