241 c2vagA_ Probab=100.00  E-value=3.5e-36  Score=231.63  Aligned_columns=253  Identities=19%

Q ss_pred             EECHHHEEEEEEEEECCCEEEEEEEECC--CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEEEEC
Q ss_conf             4478885888666324882899999779--9489999986310498999999999984699857------3089999768
Q batch____       357 VIDPSELTFVQEIGSGQFGLVHLGYWLN--KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL------VQLYGVCLEQ  428 (620)
Q Consensus       357 ei~~~~~~~~~~lG~G~fG~V~~g~~~~--~~~VAvK~~~~~~~~~~~f~~E~~~l~~l~H~ni------v~l~g~~~~~  428 (620)
                      ++-.+.+++.++||+|+||.||+|+...  +..||||+++......+.+++|+++|+.|+|+|+      +.+.+.....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEECCCCCEEECC
Q ss_conf             95899998888883899998617898899999999999999999998495646778556103678748984444304424
Q batch____       429 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL  508 (620)
Q Consensus       429 ~~~~iv~E~~~~gsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLh~~~iiHrdl~~~Nili~~~~~~Ki~DFGlar~~~  508 (620)
                      ..++++++++..+.+..................+..++..++.++|..+++|+|+++.||+++.++..++.||+.++...
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~~  168 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTLI  168 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEES
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCC
T ss_conf             00001221123675211122211101365655555445555543110122223455415898578862000345433444


Q ss_pred             CCCEEEEC----------CCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC-----
Q ss_conf             78424312----------554587778977983799974789999999999999488899999898999999980-----
Q batch____       509 DDQYTSST----------GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-----  573 (620)
Q Consensus       509 ~~~~~~~~----------~~~~~~~~~APE~l~~~~~s~ksDVwSfGvil~Ei~t~g~~P~~~~~~~~~~~~i~~-----  573 (620)
                      ........          .......+.+||......++.++|+|++|++++++.+ ++.|+...+..+.+..+..     
T Consensus       169 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  247 (330)
T c2vagA_         169 NPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGPL  247 (330)
T ss_dssp             CCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCSC
T ss_pred             CCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             4321000146633267542001210232100000111123542102258731004-889887589689999998513889


Q ss_pred             --------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
Q ss_conf             --------------------------------------8887887438999999999863789678698999999
Q batch____       574 --------------------------------------GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR  610 (620)
Q Consensus       574 --------------------------------------g~~~~~p~~~~~~l~~li~~C~~~dp~~RPs~~~i~~  610 (620)
                                                            ......+..+++++.+||.+||+.||++|||+++|++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~  322 (330)
T c2vagA_         248 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  322 (330)
T ss_dssp             CHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC
T ss_conf             988974420121235465665321000111001233310023565458999999999866588111776789967


