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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank108Aligned Residues243
% Identity20%Templatec2r5tA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase sgk1; PDBTitle: crystal structure of inactive serum and glucocorticoid-2 regulated kinase 1 in complex with amp-pnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380... ......390.........400.........410.........420.........430......
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Query Sequence  IDPSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE
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Template Sequence  AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKK. . . . . . . . AILVLLKNVKHPFLVGLHFSFQTADKLYFVLD
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GGG

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   93......100.........110.........120.........130.. .......140.........150.........160....
 
   437..440.........450.........460.........470.........480.........490.........500.........510......
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Query Sequence  FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST
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Template Sequence  YINGGELFYHLQRERC. FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK. ENIEHNSTTS
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BSS.

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   178.180.........190... ......200.........210.........220.........230.........240..... ....250.....
 
   517..520.........530.........540.........550.........560.........570.........580.........590......
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Query Sequence  GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWK
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Template Sequence  TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY. GLPPFYSRNTAEMYDNILNK. PLQLKPNITNSARHLLEGLLQ
Template Known Secondary structure  SBS






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   256...260.........270.........280.........290.. .......300.........310.. .......320.........330...
 
   597..600.........610..
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Query Sequence  ERPEDRPAFSRLLRQL
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Template Sequence  KDRTKRLGAKDDFMEI
Template Known Secondary structure  SSGGGSTTTTTT
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   334.....340.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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