Job Description Q08881 Confidence 99.61% Date Tue Apr 3 14:36:05 BST 2012 Rank 392 Aligned Residues 95 % Identity 29% Template c2r09A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:cytohesin-3; PDBTitle: crystal structure of autoinhibited form of grp1 arf gtpase exchange2 factor Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	I	L	L	E	E	Q	L	I	K	K	S	Q	Q	K	R	R	T	S	P	S	N	F	K	V	R	F	F	V	L	T	K	A	S	L	A	Y	F	E	D	R	H	G	K	K	R	T	L	K	G	S	I	E	L	S	R	I	K	C	V	E	I	V	K	S	D	I	S	I	P	C	H	Y	K	Y	P	F	Q	V
Query Conservation
Alig confidence																				.	.	.	.	.																								.	.																			.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																								.	.																			.	.	.	.	.	.
Template Sequence		F	N	P	D	R	E	G	W	L	L	K	L	G	G	R	V	K	T	.	.	.	.	.	W	K	R	R	W	F	I	L	T	D	N	C	L	Y	Y	F	E	Y	T	T	D	K	E	.	.	P	R	G	I	I	P	L	E	N	L	S	I	R	E	V	E	D	P	.	.	.	.	.	.	R	K	P	N	C	F	E	L
Template Known Secondary structure															S	S	S			.	.	.	.	.										T	T						S	S	T	T		S	S	.	.		S						T	T									S	.	.	.	.	.	.	S		S	S
Template Predicted Secondary structure																				.	.	.	.	.																								.	.																			.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.							.	.	.	.	.	.	.	.
		83																							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	N	Y	L	L	Y	V	F	A	P	D	R	E	S	R	Q	R	W	V	L	A	L	K	E	E	T
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	P	S	H	K	G	Q	V	I	K	A	C	K	T	E	A	D	G	R	V	V	E	G	N	H	V	V	Y	R	I	S	A	P	S	P	E	E	K	E	E	W	X	K	S	I	K	A	S	I
Template Known Secondary structure				S	S	S	T	T										T	T	S								S							S	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions