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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank79Aligned Residues245
% Identity24%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380.... .....390... ......400.........410.........420.........430........
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Query Sequence  SELTFVQEIGSGQFGLVHLGYWLN. KDKVAIKTI. REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC
Template Known Secondary structure  TTTTT

TTT
S
TT

BTTB


SS


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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   439440.........450.........460.........470.........480.........490 .........500.........510.....
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Query Sequence  EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV. . . GENQVIKVSDFGMTRFVLDDQYTSS
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Template Sequence  TGGELFERVVHKRV. FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT
Template Known Secondary structure 
SGGGGGTTTSS.

TT



SGGGSSSSTT




TT


TT

B

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   106...110......... 120.........130.........140.........150.........160.........170.........180....
 
   516...520.........530.........540.........550.........560.........570.........580 .........590...
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Query Sequence  TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP. . RLASTHVYQIMNH
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Template Sequence  KV. . GTPYYVSPQVLEGL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIRR
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..S
GGGS
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TT.SS
S


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   185. ...190.........200 .........210......... 220.........230.........240.........250.........260
 
   594.....600.........610
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Query Sequence  CWKERPEDRPAFSRLLR
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Template Sequence  LLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

TT
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   262.......270........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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