Job Description Q08881 Confidence 99.47% Date Tue Apr 3 14:36:05 BST 2012 Rank 431 Aligned Residues 88 % Identity 10% Template c2q13A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:dcc-interacting protein 13 alpha; PDBTitle: crystal structure of bar-ph domain of appl1 Resolution 2.05 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	E	Q	L	I	K	K	S	Q	Q	K	R	R	T	S	P	S	N	F	K	V	R	F	F	V	L	T	K	A	S	L	A	Y	F	E	D	R	H	G	K	K	R	T	L	K	G	S	I	E	L	S	R	I	K	C	V	E	I	V	K	S	D	I	S	I	P	C	H	Y	K	Y	P	F	Q	V	V	H	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.																	.	.	.																									.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.																	.	.	.																									.	.	.	.	.	.
Template Sequence		R	K	A	G	Y	L	N	A	R	T	.	.	.	.	.	.	.	.	.	.	W	D	R	Q	F	Y	F	T	Q	G	G	N	L	M	S	Q	.	.	.	A	R	G	D	V	A	G	G	L	A	M	D	I	D	N	C	S	V	M	A	V	D	C	E	.	.	.	.	.	.	D	R	R	Y	C	F	Q	I	T	S	F
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.										T	T						.	.	.		S	S		S	S								T	T									T	.	.	.	.	.	.	T		S	S							T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																	.	.	.																									.	.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.							.	330	.	.	.	.	.	.	.	.	.
		86			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		N	.	.	Y	L	L	Y	V	F	A	P	D	R	E	S	R	Q	R	W	V	L	A	L	K	E	E	T	R	N
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		D	G	K	K	S	S	I	L	Q	A	E	S	K	K	D	H	E	E	W	I	C	T	I	N	N	I	S	K	Q
Template Known Secondary structure		T	S		B							S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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