Job Description Q08881 Confidence 99.76% Date Tue Apr 3 14:36:05 BST 2012 Rank 342 Aligned Residues 108 % Identity 31% Template c2kk6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fer; PDBTitle: solution structure of sh2 domain of proto-oncogene tyrosine-2 protein kinase fer from homo sapiens, northeast structural3 genomics consortium (nesg) target hr3461d Resolution UNK

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		G	Y	V	P	S	S	Y	L	V	E	K	S	P	N	N	L	E	T	Y	E	W	Y	N	K	S	I	S	R	D	K	A	E	K	L	L	L	D	T	G	K	E	G	A	F	M	V	R	D	S	R	T	.	A	G	T	Y	T	V	S	V	F	T	K	A	V	V	S	E	N	N	P	C	I	K	H	Y	H	I	K	E
Query Conservation																																																					.
Alig confidence													.	.	.																							.	.	.													.											.	.	.	.	.	.	.
Template Conservation													.	.	.																							.	.	.																								.	.	.	.	.	.	.
Template Sequence		G	H	H	H	H	H	H	S	H	M	K	.	.	.	P	L	A	E	Q	D	W	Y	H	G	A	I	P	R	I	E	A	Q	E	L	L	K	.	.	.	K	Q	G	D	F	L	V	R	E	S	H	G	K	P	G	E	Y	V	L	S	V	Y	S	.	.	.	.	.	.	.	D	G	Q	R	R	H	F	I	I	Q	Y
Template Known Secondary structure			S	S	S				S	S			.	.	.		T	T	T		T	T				S									T			.	.	.	S	T	T								T	T		T	T									.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure													.	.	.																							.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		T	N	D	N	P	K	R	Y	Y	V	A	E	K	Y	V	F	D	S	I	P	L	L	I	N	Y	H	Q	H	N	G	G	.	.	.	.	G	L	V	T	R	L	R	Y	P	V	C	F	G	R	Q
Query Conservation																																	.	.	.	.
Alig confidence					.	.	.	.																									.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		V	D	N	.	.	.	.	M	Y	R	F	E	G	T	G	F	S	N	I	P	Q	L	I	D	H	H	Y	T	T	K	Q	V	I	T	K	K	S	G	V	V	L	L	N	P	I	P	K	D	K	K
Template Known Secondary structure			T	T	.	.	.	.				S	S	S				S												T	T			S		T	T	T	T					S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		69	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions