Job Description Q08881 Confidence 99.70% Date Tue Apr 3 14:36:05 BST 2012 Rank 359 Aligned Residues 101 % Identity 21% Template c2izvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:suppressor of cytokine signaling 4; PDBTitle: crystal structure of socs-4 in complex with elongin-b and2 elongin-c at 2.55a resolution Resolution 2.55 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																						.																																											.
Query SS confidence																																						.																																											.
Query Sequence		L	E	T	Y	E	W	Y	N	K	S	I	S	R	D	K	A	E	K	L	L	L	D	T	G	K	E	G	A	F	M	V	R	D	S	R	T	.	A	G	T	Y	T	V	S	V	F	T	K	A	V	V	S	E	N	N	P	C	I	K	H	Y	H	I	K	E	T	N	D	N	P	K	R	Y	Y	V	A	E	K	Y	.
Query Conservation																																						.																																											.
Alig confidence																									.													.											.	.	.	.	.	.	.																.	.	.								.
Template Conservation																									.																								.	.	.	.	.	.	.																.	.	.
Template Sequence		I	N	N	N	P	C	Y	W	G	V	M	D	K	Y	A	A	E	A	L	L	E	G	K	.	P	E	G	T	F	L	L	R	D	S	A	Q	E	D	Y	L	F	S	V	S	F	R	R	.	.	.	.	.	.	.	Y	S	R	S	L	H	A	R	I	E	Q	W	N	H	N	.	.	.	F	S	F	D	A	H	D	P
Template Known Secondary structure						T	T															T	T		.		T	T								S	S	T	T		S								.	.	.	.	.	.	.	T	T											T	T		.	.	.			S		T	T		T
Template Predicted Secondary structure																									.																								.	.	.	.	.	.	.																.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.								.	.	.	330	.	.	.	.	.	.	.	.	.	340	.				.	.	.	.	.	.	.	.
					312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure		.	.	.																							.	.
Query SS confidence		.	.	.																							.	.
Query Sequence		.	.	.	V	F	D	S	I	P	L	L	I	N	Y	H	Q	H	N	G	G	G	L	V	T	R	.	.	L	R	Y	P	V	C	F	G	R	Q	K	A
Query Conservation		.	.	.																							.	.
Alig confidence		.	.	.																							.	.
Template Conservation
Template Sequence		C	V	F	H	S	P	D	I	T	G	L	L	E	H	Y	K	D	P	S	A	C	M	F	F	E	P	L	L	S	T	P	L	I	R	T	F	P	F	S
Template Known Secondary structure		T	S			B	S	S								T			G	G	G			T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions