Return to main results Retrieve Phyre Job Id

Job DescriptionQ08881
Confidence99.86%DateTue Apr 3 14:36:05 BST 2012
Rank304Aligned Residues106
% Identity54%Templatec2ekxA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic tyrosine-protein kinase bmx; PDBTitle: solution structure of the human bmx sh2 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   231........240.........250.........260.........270.........280.........290.........300.........310
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  PNNLETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTAGTYTVSVFTKAVVSENNPCIKHYHIKETNDNPKRYYVAEK
Query Conservation     

   

 
 


 


 

      
 



 
   
 



             



 
           
   
Alig confidence 


















































.



















..





Template Conservation     
    

 
 
 
 


 

      
 



 
       


    .         
          ..      
Template Sequence  SSGLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKA. VNDKKGTVKHYHVHTNAENK. . LYLAEN
Template Known Secondary structure  SS
TTTSSSB

S

T

TT
SSTT




.SS
SS




TT

..SSTT
Template Predicted Secondary structure 



























.








..


Template SS confidence 















































































   5....10.........20.........30.........40.........50..... ....60.........70..... ....80.
 
   311........320.........330.........
Predicted Secondary structure 













Query SS confidence 




























Query Sequence  YVFDSIPLLINYHQHNGGGLVTRLRYPVC
Query Conservation    
 

  

        

   
  
  
Alig confidence 




























Template Conservation    
 

  

  
      
   
  


Template Sequence  YCFDSIPKLIHYHQHNSAGMITRLRHPVS
Template Known Secondary structure 


S
S

SSS





Template Predicted Secondary structure 














Template SS confidence 




























   82.......90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions