Job Description Q08881 Confidence 99.60% Date Tue Apr 3 14:36:05 BST 2012 Rank 396 Aligned Residues 101 % Identity 17% Template c2dtcB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:ral guanine nucleotide exchange factor ralgps1a; PDBTitle: crystal structure of ms0666 Resolution 1.70 Å

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		6	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure											.	.	.																																				.	.	.	.	.	.	.
Query SS confidence											.	.	.																																				.	.	.	.	.	.	.
Query Sequence		L	L	E	E	Q	L	I	K	K	.	.	.	S	Q	Q	K	R	R	T	S	P	S	N	F	K	V	R	F	F	V	L	T	K	A	S	L	A	Y	F	E	D	R	H	G	K	K	R	.	.	.	.	.	.	.	T	L	K	G	S	I	E	L	S	R	I	K	C	V	E	I	V	K	S	D	I	S	I	P	C	H
Query Conservation											.	.	.																																				.	.	.	.	.	.	.
Alig confidence											.	.	.									.																											.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																						.																																																					.	.	.	.	.	.
Template Sequence		T	X	E	G	P	L	R	R	K	T	L	L	K	E	G	R	K	P	A	L	.	S	S	W	T	R	Y	W	V	V	L	S	G	A	T	L	L	Y	Y	G	A	K	S	L	R	G	T	D	R	K	H	Y	K	S	T	P	G	K	K	V	S	I	V	G	W	X	V	Q	L	P	D	D	P	.	.	.	.	.	.	E
Template Known Secondary structure														B	T	T	B			S		.												T	T							B	S	S	S	S			S	G	G	G	B		S	S		S						T	T									T	.	.	.	.	.	.	T
Template Predicted Secondary structure																						.																																																					.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.
		76	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		Y	K	Y	P	F	Q	V	V	H	.	.	D	N	Y	L	L	Y	V	F	A	P	D	R	E	S	R	Q	R	W	V	L	A	L	K	E	E	T	R	N	N
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		H	P	D	I	F	Q	L	N	N	P	D	K	G	N	V	Y	K	F	Q	T	G	S	R	F	H	A	I	L	W	H	K	H	L	D	D	A	C	K	S	S
Template Known Secondary structure		S	T	T							T	T	S		S							S	S																T	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions