Job Description Q08881 Confidence 99.61% Date Tue Apr 3 14:36:05 BST 2012 Rank 393 Aligned Residues 115 % Identity 17% Template c2dhkA_ PDB info PDB header:immune system Chain: A: PDB Molecule:tbc1 domain family member 2; PDBTitle: solution structure of the ph domain of tbc1 domain family2 member 2 protein from human Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	F	I	L	L	E	E	Q	L	I	K	K	S	Q	Q	K	R	R	T	S	P	S	N	F	K	V	R	F	F	V	L	T	K	A	S	L	A	Y	F	E	D	R	H	G	K	K	R	T	L	K	G	S	I	E	L	S	R	I	K	C	V	E	I	V	K	S	D	I	S	I	P	C	H	Y	K	Y	P	F	Q
Query Conservation
Alig confidence																							.	.	.																																											.	.	.	.	.	.	.
Template Conservation																							.	.	.																																											.	.	.	.	.	.	.
Template Sequence		S	S	G	K	K	L	C	G	Y	L	S	K	F	G	G	K	G	P	I	R	G	.	.	.	W	K	S	R	W	F	F	Y	D	E	R	K	C	Q	L	Y	Y	S	R	T	A	Q	D	A	N	P	L	D	S	I	D	L	S	S	A	V	F	D	C	K	A	D	.	.	.	.	.	.	.	A	E	E	G	I	F	E
Template Known Secondary structure			S												S		S	S	S	S			.	.	.										T	T	T	T						S	S	T	T			S		S					G	G	G							T	T	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																							.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	H	D	N	Y	L	L	Y	V	F	A	P	D	R	E	S	R	Q	R	W	V	L	A	L	K	E	E	T	R	N	N	N	S	L	V	P	K	Y	H	P	N	F	W	M	D	G
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		I	K	T	P	S	R	V	I	T	L	K	A	A	T	K	Q	A	M	L	Y	W	L	Q	Q	L	Q	M	K	R	W	E	F	H	N	S	P	P	.	.	A	P	S	G	P	S	S	G
Template Known Secondary structure					S	S								S	S																					S		S	.	.	S	S	S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions