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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank66Aligned Residues236
% Identity27%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   355....360.........370.........380... ......390.... .....400.........410.........420.........
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Query Sequence  KWVIDPSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIR. . . . EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA
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Template Sequence  QWAL. . EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT
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G..GG
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   127..130 .........140.........150.........160.........170.........180.........190.........200....
 
   430.........440.........450.........460.........470.........480.........490.........500.........
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Query Sequence  PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD
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Template Sequence  RVYLILEYAPLGTVYRELQKL. SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . . .
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TT
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   205....210.........220..... ....230.........240.........250.........260.........270........
 
   510.........520.........530.........540.........550.........560.........570.........580.........
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Query Sequence  DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQ
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Template Sequence  . . . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGARD
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GGG

GGGTTTTSSGGG.SS
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   279280.........290.........300.........310.. .......320.........330.. .......340......
 
   590.........600.........610
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Query Sequence  IMNHCWKERPEDRPAFSRLLR
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Template Sequence  LISRLLKHNPSQRPMLREVLE
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SSGGGS

T
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   359360.........370.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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