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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank96Aligned Residues247
% Identity23%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   360.........370.........380... ......390.........400. ........410.........420.........430.....
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Query Sequence  PSELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIREGAMSEE. . . DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF
Template Known Secondary structure  TTTTTTTT


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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   436...440.........450.........460.........470.........480.........490. ........500.........510..
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Query Sequence  EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG. . . ENQVIKVSDFGMTRFVLDDQY
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Template Sequence  DLVTGGELFEDIVAR. EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA
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   90.........100.... .....110.........120.........130.........140.........150.........160........
 
   513......520.........530.........540.........550.........560.........570.........580 .........
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Query Sequence  TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP. . . RLASTHVYQ
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Template Sequence  WHGFAG. . TPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS
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   170..... ....180.........190.........200........ .210.........220.........230.........240......
 
   590.........600.........610
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Query Sequence  IMNHCWKERPEDRPAFSRLLR
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Template Sequence  LIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   247..250.........260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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