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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank218Aligned Residues241
% Identity20%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361....... .370.........380... ......390... ......400.........410... ......420.........430......
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Query Sequence  SELTFVQE. IGSGQFGLVHLGYWL. NKDKVAIKTI. REGAMSEEDFIEEAEVMMKL. SHPKLVQLYGVCLEQAPICLVFE
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Template Sequence  DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE
Template Known Secondary structure  GS
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   437..440.........450.........460.........470.........480.........490.........500.........510......
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Query Sequence  FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST
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Template Sequence  KMRGGSILSHIHKR. RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGPCGSAEYMAPE
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   161........170.... .....180.........190.........200.........210.........220.........230.........
 
   517..520.........530.........540.........550.........560... ......570.........580 ..
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Query Sequence  GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS. . . . . . . . . . . NSEVVEDISTGFRLYKP. . . RL
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Template Sequence  . . . . . . . VVEAFSEEASIYDKRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDWAH
Template Known Secondary structure  .......SSSTTTT.SS
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   261........270.........280.........290 .........300.........310.........320.........330..
 
   583......590.........600.........610
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Query Sequence  ASTHVYQIMNHCWKERPEDRPAFSRLLR
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Template Sequence  ISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  S
S
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TTTS

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   337..340.........350.........360....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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