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Job DescriptionQ08881
Confidence100.00%DateTue Apr 3 14:36:05 BST 2012
Rank94Aligned Residues245
% Identity22%Templatec1xjdA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, theta type; PDBTitle: crystal structure of pkc-theta complexed with staurosporine2 at 2a resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   361........370.........380... ......390.... .....400.........410.. .......420.........430....
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Query Sequence  SELTFVQEIGSGQFGLVHLGYWL. NKDKVAIKTIR. . . . EGAMSEEDFIEEAEVMMK. LSHPKLVQLYGVCLEQAPICLV
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Template Sequence  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV
Template Known Secondary structure  TT
SSSTTTTTT
TT
TTB


SS
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   378.380.........390.........400.........410.........420.........430.........440.........450.......
 
   435....440.........450.........460.........470.........480.........490.........500.........510....
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Query Sequence  FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS
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Template Sequence  MEYLNGGDLMYHIQSC. HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT
Template Known Secondary structure 

TT
B.SS

TT
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GGG
TTS



TT
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TT

B
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   458.460.........470... ......480.........490.........500.........510.........520.........530......
 
   515....520.........530.........540.........550.........560.........570.........580.........590....
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Query Sequence  STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC
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Template Sequence  NFCG. . TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI. GQSPFHGQDEEELFHSIRMD. NPFYPRWLEKEAKDLLVKL
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S..
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   537..540 .........550.........560.........570... ......580.........590... ......600.........610..
 
   595....600..... ....610
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Query Sequence  WKERPEDRPAF. SRLLR
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Template Sequence  FVREPEKRLGVRGDIRQ
Template Known Secondary structure  S
SSGGGSBTTBS
GGG
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   614.....620.........630
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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