Job Description Q08881 Confidence 99.72% Date Tue Apr 3 14:36:05 BST 2012 Rank 351 Aligned Residues 104 % Identity 17% Template c1u5fA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:src-associated adaptor protein; PDBTitle: crystal structure of the ph domain of skap-hom with 8 vector-derived2 n-terminal residues Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	I	L	L	E	E	Q	L	I	K	K	S	Q	Q	K	R	R	T	S	P	S	N	F	K	V	R	F	F	V	L	T	K	A	S	L	A	Y	F	E	D	R	H	G	K	K	R	T	L	K	G	S	I	E	L	S	R	I	K	C	V	E	I	V	K	S	D	I	S	I	P	C	H	Y	K	Y	P	F	Q	V
Query Conservation
Alig confidence																						.																										.	.																							.	.
Template Conservation																						.																										.	.																							.	.
Template Sequence		P	F	V	I	K	A	G	Y	L	E	K	R	R	K	D	H	S	F	L	G	.	F	E	W	Q	K	R	W	C	A	L	S	K	T	V	F	Y	Y	Y	G	S	D	K	D	K	Q	.	.	Q	K	G	E	F	A	I	D	G	Y	D	V	R	M	N	N	T	L	R	K	D	G	.	.	K	K	D	C	C	F	E	I
Template Known Secondary structure		S	S														S	S		S	S	.		S										T	T						S	S	T	T		S	S	.	.		S						T	T							T	T	S		S	S	T	.	.	T	G	G	G
Template Predicted Secondary structure																						.																										.	.																							.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		V	H	D	N	Y	L	L	Y	V	F	.	A	P	D	R	E	S	R	Q	R	W	V	L	A	L	K	E	E	T	R
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		C	A	P	D	K	R	I	Y	Q	F	T	A	A	S	P	K	D	A	E	E	W	V	Q	Q	L	K	F	I	L	Q
Template Known Secondary structure				T	T	S								S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions