Job Description Q06124 Confidence 99.77% Date Wed May 9 17:40:46 BST 2012 Rank 134 Aligned Residues 82 % Identity 29% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		E	R	W	F	H	G	H	L	S	G	K	E	A	E	K	L	L	T	E	K	G	K	H	G	S	F	L	V	R	E	S	Q	S	H	P	G	D	F	V	L	S	V	R	T	G	D	D	K	G	E	S	N	D	G	K	S	K	V	T	H	V	M	I	R	.	.	.	C	Q	E	L	K	Y	D	V	G	G	G	E	R
Query Conservation																																																																		.	.	.
Alig confidence							.																.																								.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation							.																.																								.	.	.	.	.	.	.	.	.
Template Sequence		H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	.	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	.	.	.	.	.	.	.	.	.	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R
Template Known Secondary structure			T	T	B		.												T	T	S		.	T	T									S	T	T											.	.	.	.	.	.	.	.	.	T	T																				S	S	S
Template Predicted Secondary structure							.																.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	S	L	T	D	L	V	E	H	Y	K	K	N	P	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	H	D	L	D	Q	I	I	V	E	Y	L	Q	N	K	I
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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