Job Description Q06124 Confidence 99.84% Date Wed May 9 17:40:46 BST 2012 Rank 100 Aligned Residues 103 % Identity 25% Template c2vifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		M	T	S	R	R	W	F	H	P	N	I	T	G	V	E	A	E	N	L	L	L	T	R	G	V	D	G	S	F	L	A	R	P	S	K	S	N	P	G	D	F	T	L	S	V	R	R	N	G	A	V	T	H	I	K	I	Q	N	T	G	D	Y	Y	D	L	Y	.	.	.	G	G	E	K	F	A	T	L	A	E	L
Query Conservation																																																																				.	.	.
Alig confidence																									.																																											.	.	.
Template Conservation																									.
Template Sequence		L	A	K	Q	G	W	Y	W	G	P	I	T	R	W	E	A	E	G	K	L	A	N	V	.	P	D	G	S	F	L	V	R	D	S	S	D	D	R	Y	L	L	S	L	S	F	R	S	H	G	K	T	L	H	T	R	I	E	H	S	N	G	R	F	S	F	Y	E	Q	P	D	V	E	G	H	T	S	I	V	D	L
Template Known Secondary structure						T		B			S										T	T	T	S	.		T	T								S	S	T	T		S								T	T											T	T					T	T			S				B	S	S
Template Predicted Secondary structure																									.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.										.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	Y	Y	M	E	H	H	.	.	.	.	.	.	.	.	.	G	Q	L	K	E	K	N	G	D	V	I	E	L	K	Y	P	L	N	C
Query Conservation										.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	H	S	I	G	D	S	E	N	G	A	F	C	Y	S	R	S	R	L	P	G	S	A	T	Y	P	V	R	L	T	N	P	V	S	R
Template Known Secondary structure												T						S			S	T	T											B			S
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions