Job Description Q06124 Confidence 100.00% Date Wed May 9 17:40:46 BST 2012 Rank 5 Aligned Residues 283 % Identity 42% Template c2nlkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein tyrosine phosphatase, receptor type, g variant PDBTitle: crystal structure of d1 and d2 catalytic domains of human protein2 tyrosine phosphatase gamma (d1+d2 ptprg) Resolution 2.40 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	N	A	A	E	I	E	S	R	V	R	E	L	S	K	L	A	E	T	T	D	K	V	K	Q	G	F	W	E	E	F	E	T	L	Q	Q	Q	E	C	K	L	L	Y	S	R	K	E	G	Q	R	Q	E	N	K	N	K	N	R	Y	K	N	I	L	P	F	D	H	T	R	V	V	L	H	D	G	D	P	N	E
Query Conservation
Alig confidence																		.	.	.	.	.	.																																																							.	.	.	.
Template Conservation																		.	.	.	.	.	.																																																							.	.	.	.
Template Sequence		A	I	P	V	K	Q	F	V	K	H	I	G	E	L	Y	S	.	.	.	.	.	.	N	N	Q	H	G	F	S	E	D	F	E	E	V	Q	R	C	T	A	D	M	N	I	T	A	E	H	S	N	H	P	E	N	K	H	K	N	R	Y	I	N	I	L	A	Y	D	H	S	R	V	K	L	R	P	L	.	.	.	.
Template Known Secondary structure					G	G	G											.	.	.	.	.	.																T	T	G	G	G					T	T	T	T	S	G	G	G	G	G	G		S	S	T	T					T	T	T								.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.																																																							.	.	.	.
Template SS confidence
		827	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.							.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	D	Y	I	N	A	N	I	I	M	P	E	F	E	T	K	C	N	N	S	K	P	K	K	S	Y	I	A	T	Q	G	C	L	Q	N	T	V	N	D	F	W	R	M	V	F	Q	E	N	S	R	V	I	V	M	T	T	K	E	V	E	R	G	K	S	K	C	V	K	Y	W	P	D	E	Y	A	L	K	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.																																																					.
Template Conservation																		.	.	.	.	.	.	.	.																																																					.
Template Sequence		P	H	S	D	Y	I	N	A	N	Y	V	D	G	Y	N	K	.	.	.	.	.	.	.	.	A	K	A	Y	I	A	T	Q	G	P	L	K	S	T	F	E	D	F	W	R	M	I	W	E	Q	N	T	G	I	I	V	M	I	T	N	L	V	E	K	G	R	R	K	C	D	Q	Y	W	P	T	E	N	.	S	E	E
Template Known Secondary structure				T	T										T	T		.	.	.	.	.	.	.	.												G	G	G												T								S		S			T	T								S		S	S	S	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																																																					.
Template SS confidence
		897	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.									.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.		.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.							.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.
Query Sequence		Y	G	V	M	R	V	R	N	V	K	E	S	A	A	H	D	Y	T	L	R	E	L	K	L	S	K	V	G	Q	.	.	.	.	.	.	A	L	L	Q	G	N	T	E	R	T	V	W	Q	Y	H	F	R	T	W	P	D	H	G	V	P	S	D	P	G	G	V	L	D	F	L	E	E	V	H	H	K	Q	E	S	I
Query Conservation																															.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																																										.	.
Template Conservation																																																																														.	.
Template Sequence		Y	G	N	I	I	V	T	L	K	S	T	K	I	H	A	C	Y	T	V	R	R	F	S	I	R	N	T	K	V	K	K	G	Q	K	G	N	P	K	G	R	Q	N	E	R	V	V	I	Q	Y	H	Y	T	Q	W	P	D	M	G	V	P	E	Y	A	L	P	V	L	T	F	V	R	R	S	S	A	A	.	.	R	M
Template Known Secondary structure			T	T												S	S											T	T	S					T	T		T	T			T	T														S	S	S	S		S		S													T	.	.
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		973	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.			.	1050
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	A	G	P	V	V	V	H	C	S	A	G	I	G	R	T	G	T	F	I	V	I	D	I	L	I	D	I	I	R	E	K	G	V	D	C	D	I	D	V	P	K	T	I	Q	M	V	R	S	Q	R	S	G	M	V	Q	T	E	A	Q	Y	R	F	I	Y	M	A	V	Q	H	Y	I
Query Conservation
Alig confidence																																				.	.	.
Template Conservation																																				.	.	.
Template Sequence		P	E	T	G	P	V	L	V	H	C	S	A	G	V	G	R	T	G	T	Y	I	V	I	D	S	M	L	Q	Q	I	K	D	K	S	.	.	.	T	V	N	V	L	G	F	L	K	H	I	R	T	Q	R	N	Y	L	V	Q	T	E	E	Q	Y	I	F	I	H	D	A	L	L	E	A	I
Template Known Secondary structure		S	S									S	S	S	S																				S	.	.	.												T	T	T	S	T	T	S	S
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		1051	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.				.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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