Job Description Q06124 Confidence 100.00% Date Wed May 9 17:40:46 BST 2012 Rank 16 Aligned Residues 329 % Identity 32% Template c2jjdA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase epsilon; PDBTitle: protein tyrosine phosphatase, receptor type, e isoform Resolution 3.20 Å

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		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		V	M	I	R	C	Q	E	L	K	Y	D	V	G	G	G	E	R	F	D	S	L	T	D	L	V	E	H	Y	K	K	N	P	M	V	E	T	L	G	T	V	L	Q	L	K	Q	P	L	N	T	T	R	I	N	A	A	E	I	E	S	R	V	R	E	L	S	K	L	A	E	T	T	D	K	V	K	.	.	.	Q	G
Query Conservation																																																																													.	.	.
Alig confidence										.	.	.																																																																	.	.	.
Template Conservation										.	.	.
Template Sequence		I	V	V	H	C	S	A	G	.	.	.	V	G	R	T	G	T	F	I	V	I	D	A	M	M	A	M	M	H	A	E	Q	K	V	D	V	F	E	F	V	S	R	I	R	N	Q	R	P	Q	M	V	Q	T	D	M	Q	Y	T	F	I	Y	Q	A	L	L	E	Y	Y	L	Y	G	D	T	E	L	D	V	S	S	G
Template Known Secondary structure							S	S	S	.	.	.	S	S																			S													T	T	S	T	T		S																			T							T	T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.				.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	W	E	E	F	E	T	L	Q	Q	Q	E	C	K	L	L	Y	S	R	K	E	G	Q	R	Q	E	N	K	N	K	N	R	Y	K	N	I	L	P	F	D	H	T	R	V	V	L	H	D	G	D	P	N	E	P	V	S	D	Y	I	N	A	N	I	I	M	P	E	F	E	T	K	C	N	N	S	K	P	K	K	S
Query Conservation
Alig confidence																.																																			.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation																.																																			.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Sequence		L	E	E	E	F	R	K	L	T	N	V	R	I	M	.	K	E	N	M	R	T	G	N	L	P	A	N	M	K	K	A	R	V	I	Q	I	I	P	Y	D	F	N	R	V	I	L	S	M	Y	.	.	.	.	.	.	T	D	Y	I	N	A	S	F	I	D	G	Y	R	Q	.	.	.	.	.	.	.	.	K	D	Y
Template Known Secondary structure											T	S				.	S	T	T						S					T	T		S	S	T	T	S				S	S	S								.	.	.	.	.	.	T	T										S	S	S	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																.																																			.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.							.	.	.	.	.	.	480	.	.	.	.	.	.	.									.	.	490
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	A	T	Q	G	C	L	Q	N	T	V	N	D	F	W	R	M	V	F	Q	E	N	S	R	V	I	V	M	T	T	K	E	V	E	R	G	K	S	K	C	V	K	Y	W	P	D	E	Y	A	L	K	E	Y	G	V	M	R	V	R	N	V	K	E	S	A	A	H	D	Y	T	L	R	E	L	K	L	S	K	V
Query Conservation
Alig confidence																																																		.																															.
Template Conservation																																																		.																															.
Template Sequence		F	I	A	T	Q	G	P	L	A	H	T	V	E	D	F	W	R	M	I	W	E	W	K	S	H	T	I	V	M	L	T	E	V	Q	E	R	E	Q	D	K	C	Y	Q	Y	W	P	T	E	.	G	S	V	T	H	G	E	I	T	I	E	I	K	N	D	T	L	S	E	A	I	S	I	R	D	F	L	V	T	L	.
Template Known Secondary structure										T	T	T											T	T								S		S			T	T								S		S	S	.	S					T	T												S	S											.
Template Predicted Secondary structure																																																		.																															.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	A	L	L	Q	G	N	T	E	R	T	V	W	Q	Y	H	F	R	T	W	P	D	H	G	V	P	S	D	P	G	G	V	L	D	F	L	E	E	V	H	H	K	Q	E	S	I	M	D	A	G	P	V	V	V	H	C	S	A	G	I	G	R	T	G	T	F	I	V	I	D	I	L	I	D	I	I	R	E	K
Query Conservation
Alig confidence		.	.	.	.	.																																													.
Template Conservation		.	.	.	.	.																																													.
Template Sequence		.	.	.	.	.	N	G	E	Q	V	R	V	V	R	Q	F	H	F	H	G	W	P	E	I	G	I	P	A	E	G	K	G	M	I	D	L	I	A	A	V	Q	K	Q	Q	Q	Q	T	G	N	.	H	P	I	T	V	H	C	S	A	G	A	G	R	T	G	T	F	I	A	L	S	N	I	L	E	R	V	K	A	E
Template Known Secondary structure		.	.	.	.	.			T	T												S		S	S	S			S																			S	T	T	.								S	S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.																																													.
Template SS confidence
							574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.		.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	D	C	D	I	D	V	P	K	T	I	Q	M	V	R	S	Q	R	S	G	M	V	Q	T	E	A	Q	Y	R	F	I	Y	M	A	V	Q	H	Y	I	E
Query Conservation
Alig confidence			.	.	.
Template Conservation			.	.	.
Template Sequence		G	.	.	.	L	L	D	V	F	Q	A	V	K	S	L	R	L	Q	R	P	H	M	V	Q	T	L	E	Q	Y	E	F	C	Y	K	V	V	Q	D	F	I	D
Template Known Secondary structure		S	.	.	.													T	T	S	T	T	S	S		S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		654				.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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