Job Description Q06124 Confidence 100.00% Date Wed May 9 17:40:46 BST 2012 Rank 31 Aligned Residues 273 % Identity 36% Template c2i75A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 4; PDBTitle: crystal structure of human protein tyrosine phosphatase n4 (ptpn4) Resolution 2.45 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E	S	R	V	R	E	L	S	K	L	A	E	T	T	D	K	V	K	Q	G	F	W	E	E	F	E	T	L	Q	Q	Q	E	C	K	L	L	Y	S	R	K	E	G	Q	R	Q	E	N	K	N	K	N	R	Y	K	N	I	L	P	F	D	H	T	R	V	V	L	H	D	G	D	P	N	E	P	V	S	D	Y
Query Conservation
Alig confidence																.	.	.	.	.																							.	.																												.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																							.	.																												.	.	.	.	.	.	.
Template Sequence		S	L	R	E	S	M	I	Q	L	A	E	G	L	I	.	.	.	.	.	T	G	T	V	L	T	Q	F	D	Q	L	Y	R	K	K	P	G	M	T	M	S	C	.	.	A	K	L	P	Q	N	I	S	K	N	R	Y	R	D	I	S	P	Y	D	A	T	R	V	I	L	K	G	.	.	.	.	.	.	.	N	D	Y
Template Known Secondary structure																.	.	.	.	.		T									S		S	S		T	T					S	.	.	T	T	S	T	T	T	G	G	G		S	S	T	T					G	G	G					S		.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.																							.	.																												.	.	.	.	.	.	.
Template SS confidence
		638	.	640	.	.	.	.	.	.	.	.	.	650	.						.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.			.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700								.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	N	I	I	M	P	E	F	E	T	K	C	N	N	S	K	P	K	K	S	Y	I	A	T	Q	G	C	L	Q	N	T	V	N	D	F	W	R	M	V	F	Q	E	N	S	R	V	I	V	M	T	T	K	E	V	E	R	G	K	S	K	C	V	K	Y	W	P	D	E	Y	A	L	K	E	Y	G	V	M	R
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		I	N	A	N	Y	I	N	M	.	.	.	.	.	.	E	I	P	S	I	I	N	Q	Y	I	A	C	Q	G	P	L	P	H	T	C	T	D	F	W	Q	M	T	W	E	Q	G	S	S	M	V	V	M	L	T	T	Q	V	E	R	G	R	V	K	C	H	Q	Y	W	P	E	P	T	G	S	S	S	Y	G	C	Y	Q
Template Known Secondary structure										.	.	.	.	.	.																	G	G	G											T	T								S		S			T	T				S				S			T	T						T	T
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		705	.	.	.	.	710	.	.							.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	N	V	K	E	S	A	A	H	D	Y	T	L	R	E	L	K	L	S	K	V	G	Q	A	L	L	Q	G	N	T	E	R	T	V	W	Q	Y	H	F	R	T	W	P	D	H	G	V	P	S	D	P	G	G	V	L	D	F	L	E	E	V	H	H	K	Q	E	S	I	M	D	A	G	P	V	V	V	H	C	S
Query Conservation
Alig confidence																							.	.	.	.	.																																										.	.
Template Conservation																							.	.	.	.	.																																										.	.
Template Sequence		V	T	C	H	S	E	E	G	N	T	A	Y	I	F	R	K	M	T	L	F	N	.	.	.	.	.	Q	E	K	N	E	S	R	P	L	T	Q	I	Q	Y	I	A	W	P	D	H	G	V	P	D	D	S	S	D	F	L	D	F	V	C	H	V	R	N	K	R	A	.	.	G	K	E	E	P	V	V	V	H	C	S
Template Known Secondary structure								B			S	S											.	.	.	.	.	T	T	T	T															S	S	S	S		S		T															T	.	.	T			S							S
Template Predicted Secondary structure																							.	.	.	.	.																																										.	.
Template SS confidence
		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.						.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.			.	.	.	.	.	.	.	850	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	G	R	T	G	T	F	I	V	I	D	I	L	I	D	I	I	R	E	K	G	V	D	C	D	I	D	V	P	K	T	I	Q	M	V	R	S	Q	R	S	G	M	V	Q	T	E	A	Q	Y	R	F	I	Y	M	A	V	Q	H	Y	I	E
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		A	G	I	G	R	T	G	V	L	I	T	M	E	T	A	M	C	L	I	E	C	N	Q	.	.	.	P	V	Y	P	L	D	I	V	R	T	M	R	D	Q	R	A	M	M	I	Q	T	P	S	Q	Y	R	F	V	C	E	A	I	L	K	V	Y	E
Template Known Secondary structure		S	S	S	S																	T	T		.	.	.													T	T	S	T	T		S		S															T
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		854	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.				.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions