Job Description Q06124 Confidence 100.00% Date Wed May 9 17:40:46 BST 2012 Rank 20 Aligned Residues 285 % Identity 42% Template c2c7sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase kappa; PDBTitle: crystal structure of human protein tyrosine phosphatase2 kappa at 1.95a resolution Resolution 1.95 Å

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	A	A	E	I	E	S	R	V	R	E	L	S	K	L	A	E	T	T	D	K	V	K	Q	G	F	W	E	E	F	E	T	L	Q	Q	Q	E	C	K	L	L	Y	S	R	K	E	G	Q	R	Q	E	N	K	N	K	N	R	Y	K	N	I	L	P	F	D	H	T	R	V	V	L	H	D	G	D	P	N	E	P
Query Conservation
Alig confidence																.	.	.	.	.	.																					.	.	.																																				.	.
Template Conservation																.	.	.	.	.	.																					.	.	.																																				.	.
Template Sequence		I	R	V	A	D	L	L	Q	H	I	N	L	M	K	.	.	.	.	.	.	T	S	D	S	Y	G	F	K	E	E	Y	E	S	F	F	E	G	Q	S	A	.	.	.	S	W	D	V	A	K	K	D	Q	N	R	A	K	N	R	Y	G	N	I	I	A	Y	D	H	S	R	V	I	L	Q	P	V	D	P	S	.	.
Template Known Secondary structure				G	G	G									T	.	.	.	.	.	.	T		S	S	S								T	S			S			S	.	.	.							S	G	G	G	G	G	G		S	S	T	T	S				G	G	G	B								G	G	.	.
Template Predicted Secondary structure																.	.	.	.	.	.																					.	.	.																																				.	.
Template SS confidence
		868	.	870	.	.	.	.	.	.	.	.	.	880	.							.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.				.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	D	Y	I	N	A	N	I	I	M	P	E	F	E	T	K	C	N	N	S	K	P	K	K	S	Y	I	A	T	Q	G	C	L	Q	N	T	V	N	D	F	W	R	M	V	F	Q	E	N	S	R	V	I	V	M	T	T	K	E	V	E	R	G	K	S	K	C	V	K	Y	W	P	D	E	Y	A	L	K	E	Y
Query Conservation
Alig confidence		.															.	.	.	.	.	.	.	.																																																				.	.
Template Conservation		.															.	.	.	.	.	.	.	.																																																				.	.
Template Sequence		.	S	D	Y	I	N	A	N	Y	I	D	G	Y	Q	R	.	.	.	.	.	.	.	.	P	S	H	Y	I	A	T	Q	G	P	V	H	E	T	V	Y	D	F	W	R	M	I	W	Q	E	Q	S	A	C	I	V	M	V	T	N	L	V	E	V	G	R	V	K	C	Y	K	Y	W	P	D	D	.	.	T	E	V	Y
Template Known Secondary structure		.	G	G			S							T	T		.	.	.	.	.	.	.	.												G	G	G												T								S		S			T	T				S				S		S	S	.	.
Template Predicted Secondary structure		.															.	.	.	.	.	.	.	.																																																				.	.
Template SS confidence
			939	940	.	.	.	.	.	.	.	.	.	950	.	.									.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.			.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	M	R	V	R	N	V	K	E	S	A	A	H	D	Y	T	L	R	E	L	K	L	S	K	V	G	Q	A	L	L	Q	G	N	T	E	R	T	V	W	Q	Y	H	F	R	T	W	P	D	H	G	V	P	S	D	P	G	G	V	L	D	F	L	E	E	V	H	H	K	Q	E	S	I	M	D	A	G	P	V	V
Query Conservation
Alig confidence																											.	.	.	.	.																																											.	.
Template Conservation																											.	.	.	.	.																																											.	.
Template Sequence		G	D	F	K	V	T	C	V	E	M	E	P	L	A	E	Y	V	V	R	T	F	T	L	E	R	.	.	.	.	.	R	G	Y	N	E	I	R	E	V	K	Q	F	H	F	T	G	W	P	D	H	G	V	P	Y	H	A	T	G	L	L	S	F	I	R	R	V	K	L	S	N	P	P	.	.	S	A	G	P	I	V
Template Known Secondary structure		T	T												S	S											.	.	.	.	.	T	T															S		S	S	S	S		S		S														S		T	.	.	T	S
Template Predicted Secondary structure																											.	.	.	.	.																																											.	.
Template SS confidence
		1008	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.						.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.			.	.	.	.	.	1080
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	C	S	A	G	I	G	R	T	G	T	F	I	V	I	D	I	L	I	D	I	I	R	E	K	G	V	D	C	D	I	D	V	P	K	T	I	Q	M	V	R	S	Q	R	S	G	M	V	Q	T	E	A	Q	Y	R	F	I	Y	M	A	V	Q	H	Y	I	E	T	L	Q	R	R	I	E	E	E	Q
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		V	H	C	S	A	G	A	G	R	T	G	C	Y	I	V	I	D	I	M	L	D	M	A	E	R	E	G	.	.	.	V	V	D	I	Y	N	C	V	K	A	L	R	S	R	R	I	N	M	V	Q	T	E	E	Q	Y	I	F	I	H	D	A	I	L	E	A	C	L	C	G	E	T	A	I	P	V	C	E
Template Known Secondary structure					S	S	S	S																				S	.	.	.															S	T	T	S	S		S																			S	S			T	T	T	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		1081	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.				.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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