Job Description Q06124 Confidence 100.00% Date Wed May 9 17:40:46 BST 2012 Rank 32 Aligned Residues 269 % Identity 40% Template c2bijA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type 5; PDBTitle: crystal structure of the human protein tyrosine phosphatase2 ptpn5 (step, striatum enriched enriched phosphatase) Resolution 2.05 Å

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		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	L	S	K	L	A	E	T	T	D	K	V	K	Q	G	F	W	E	E	F	E	T	L	Q	Q	Q	E	C	K	L	L	Y	S	R	K	E	G	Q	R	Q	E	N	K	N	K	N	R	Y	K	N	I	L	P	F	D	H	T	R	V	V	L	H	D	G	D	P	N	E	P	V	S	D	Y	I	N	A	N	I
Query Conservation
Alig confidence												.	.	.	.																	.	.	.	.
Template Conservation												.	.	.	.																	.	.	.	.
Template Sequence		A	E	E	L	H	E	K	A	L	D	.	.	.	.	P	F	L	L	Q	A	E	F	F	E	I	P	M	N	F	V	.	.	.	.	D	P	K	E	Y	D	I	P	G	L	V	R	K	N	R	Y	K	T	I	L	P	N	P	H	S	R	V	C	L	T	S	P	D	P	D	D	P	L	S	S	Y	I	N	A	N	Y
Template Known Secondary structure									T	T		.	.	.	.									T	T	S						.	.	.	.		G	G	G				T	T	G	G	G	G		S	S	T	T					G	G	G						S	S		T	T
Template Predicted Secondary structure												.	.	.	.																	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	P	E	F	E	T	K	C	N	N	S	K	P	K	K	S	Y	I	A	T	Q	G	C	L	Q	N	T	V	N	D	F	W	R	M	V	F	Q	E	N	S	R	V	I	V	M	T	T	K	E	V	E	R	G	K	S	K	C	V	K	Y	W	P	D	E	Y	A	L	K	E	Y	G	V	M	R	V	R	N	V	K
Query Conservation
Alig confidence									.	.	.	.	.	.	.																																							.	.	.	.										.	.
Template Conservation									.	.	.	.	.	.	.																																							.	.	.	.										.	.
Template Sequence		I	R	G	Y	G	G	E	.	.	.	.	.	.	.	E	K	V	Y	I	A	T	Q	G	P	I	V	S	T	V	A	D	F	W	R	M	V	W	Q	E	H	T	P	I	I	V	M	I	T	N	I	E	E	.	.	.	.	K	C	T	E	Y	W	P	E	E	.	.	Q	V	A	Y	D	G	V	E	I	T	V	Q	K
Template Known Secondary structure					G	G	G		.	.	.	.	.	.	.	T	T	S									G	G	G												T										T	T		.	.	.	.						S		S	S	.	.					T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.																																							.	.	.	.										.	.
Template SS confidence
		335	.	.	.	.	340	.								.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.			.	390	.	.	.	.	.	.	.	.	.	400	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.		.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		E	S	A	A	H	D	Y	T	L	R	E	L	K	L	S	K	V	G	Q	A	L	L	Q	G	N	T	E	R	T	V	W	Q	Y	H	F	R	T	W	P	D	H	G	V	P	S	D	P	G	G	V	L	D	F	L	E	E	V	H	H	K	Q	E	S	.	I	M	D	A	G	P	V	V	V	H	C	S	A	G	I	G
Query Conservation																																																																	.
Alig confidence																		.	.	.	.	.	.	.																																									.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		V	I	H	T	E	D	Y	R	L	R	L	I	S	L	K	S	.	.	.	.	.	.	.	G	T	E	E	R	G	L	K	H	Y	W	F	T	S	W	P	D	Q	K	T	P	D	R	A	P	P	L	L	H	L	V	R	E	V	E	E	A	A	Q	Q	E	G	P	H	C	A	P	I	I	V	H	C	S	A	G	I	G
Template Known Secondary structure						S	S											.	.	.	.	.	.	.	T	T															S	S			G	G	G																	T	T		S	S									S	S	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420								.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	G	T	F	I	V	I	D	I	L	I	D	I	I	R	E	K	G	V	D	C	D	I	D	V	P	K	T	I	Q	M	V	R	S	Q	R	S	G	M	V	Q	T	E	A	Q	Y	R	F	I	Y	M	A	V	Q	H	Y	I	E	T	L
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		R	T	G	C	F	I	A	T	S	I	C	C	Q	Q	L	R	Q	E	G	.	.	.	V	V	D	I	L	K	T	T	C	Q	L	R	Q	D	R	G	G	M	I	Q	T	C	E	Q	Y	Q	F	V	H	H	V	M	S	L	Y	E	K	Q	L
Template Known Secondary structure																				S	.	.	.		B													S	T	T	S	S		S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.				.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions